Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3392 ATGACTTCGGCATCGAAAGTTGATGAAGAGAAGAATGGTAACAGAGGTAACATGTGGGATATGGAGCAGAAATTTGACCAACCGATGGACGAGGAAGCGGGAAAGCTCAGAAATATGGATAGAGAAAAAAAGTTTTCTACATTGTTGGTTATACGGCTTGCATACCAGAGTCTCGGTGTAGTTTATGGAGATTTGGGAACTTCTCCATTATACGTTTTCTATAACACGTTTCCTCGTGGAGTTGATGATCCAGAGGACGTGATTGGAGCTCTTTCGTTGATCATTTACTCGCTTACTCTTGTGCCGCTGCTCAAATATGTTTTTATTGTGTTAAGAGCAAATGACAACGGTCAAGGTGGAACACTGGCTTTATATTCCTTGCTCTGCCGACACGCGAACATAAAAATCATTCCCAACCGGCATCGCACGGATGAAAAGTTAACGACATATAGCTGGACTACAAGTCATGAAAAGTCATTTGCTGCGAAAACCCAAAGATGGTTAGAGGGACATTTTATTAAAAATGCCCTTCTTATTCTTGTCCTTGTTGGCACCTGCATGGTGATTGGAGATGGTATTCTTACTCCGGCTATATCTGTTTTATCTGCTGCTGGTGGCATCAGAGTAAACAAACCTGAAATTGATAACAGAGTAGTTGTGCTTGTTGCGGTTGTAATATTAGTTGGGCTATTCAGCGTGCAACATTTTGGTACAGATAAAGTTGGTTGGCTCTTTGCTCCAATTGTTCTGGTTTGGTTACTCCTAATTGGAGGTATAGGCATATACAACATTTCGAGATTCGGTGCCAGAGTCCTAAGAGCCTTTTCGCCTGTCTATGTGTATCGGTATCTAAGAAACGGAAAAAAAAAGAGTTGGCTTTCCCTTGGCGGCATCTTGCTCAGCATAACTGGGACAGAAGCTCTTTTTGCCGACTTAGCCAATTATCCAGTCTTATCGGTACAAATTGCATTTACTCTTCTTGTGTTTCCTTGCCTTCTTTTAGCTTATTCTGGACAGGCAGCTTATCTGGTGAATAACCTGCATCATTCAGGTGATGTTTTTTATCGCTGTATTCCAGAAAAAATATATTGGCCTGTATTTGTTATTGCAACACTAGCAGCAATAGTTGCAAGCCAGGCCACAATAACAGCAACCTTTTCAATCATTAAGCAAGCCCTTGCTCATGGCTGTTTCCCAAGAGTCAAAGTTGTTCATACATCAAAAAAGTTCCTTGGCCAGATATATATCCCCGATATCAATTGGATCCTTATGATTCTTTGCATTGCTGTTACTGCCGGCTTTAAAAATCAAAGTCAGATCGGAAATGCATATGGCACTGCAGTTGTGTGTGTCATGTTGGTTACAACACTGCTCATGATTTTGGTCATGATATTAGTTTGGCACTGCCATTGGATTCTTGTGATTGTGTTTACTGTCTTATCATTGATTGTGGAATGCACATACTTTTCTGCTGTACTCTTCAAAGTCGATCAAGGCGGTTGGGGCCCACTTGCAATTGCCGGAGTGTTTCTGCTTGTTATGTATGTTTGGCATTATGGTACACTGAAGCGTTACGAGTTTGAATTGCATAGTAAAGTCTCAATGGCATGGATTCTTGGTCTCGGTCCCAGTTTAGGACTTGTTCGTGTCCCAGGAGTCGGCCTAGTCTACACAGAACTCGCAAGTGGAGTTCCCCACATATTTTCTCATTTTATTACCAACCTACCAGCCATTCATTCTGTCGTTGTTTTTGTCTGTGTGAAATATCTTCCCGTCTACACCGTCCCGGAAGAAGAACGGTTCCTTGTCAAGCGTATCGGACCAAAAAACTTCCACATTTTTCGATGTGTGGCGCGATATGGATATAAAGACCTGCATAAGAAAGACAGCAGTTTTGAGAAGAAACTCTTTAACAACCTTTTCATGTTTGTTCGACTTGAATCCATGATGGAAGATTGCTCTGATTCGGAATACAGTCCATGTGAACCGCGAAGCGAACAGTCAAATAACAACGGAAACACAAATTCATTGGGTAATGGGGATTTAACAACTTCATCTGTCGACTTAATAGATACTGCAAGATCGCTGGCAGATGTGAATGTTACTTTTCAATCCTCTAGCCCTTGCACTGAGGTTGATGAATATGAATTTTTAAACAACTCTAGAGAATCTGGTGTTGTTCACATACTAGGAAACACAGTTGTGGTTGCTAGTAGAGATTCAAGATTCTACAAGAAAATAGCTATTGATTATATATATGCATTTCTTAGAAAGATATGCAGGGAAAATAGTGTGATCTTCAATATTCCTCACGAGAGTCTGTTAAATGTTGGTCAAGTTTTCTATGTCTAG 2352 0.4082 MTSASKVDEEKNGNRGNMWDMEQKFDQPMDEEAGKLRNMDREKKFSTLLVIRLAYQSLGVVYGDLGTSPLYVFYNTFPRGVDDPEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTLALYSLLCRHANIKIIPNRHRTDEKLTTYSWTTSHEKSFAAKTQRWLEGHFIKNALLILVLVGTCMVIGDGILTPAISVLSAAGGIRVNKPEIDNRVVVLVAVVILVGLFSVQHFGTDKVGWLFAPIVLVWLLLIGGIGIYNISRFGARVLRAFSPVYVYRYLRNGKKKSWLSLGGILLSITGTEALFADLANYPVLSVQIAFTLLVFPCLLLAYSGQAAYLVNNLHHSGDVFYRCIPEKIYWPVFVIATLAAIVASQATITATFSIIKQALAHGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVCVMLVTTLLMILVMILVWHCHWILVIVFTVLSLIVECTYFSAVLFKVDQGGWGPLAIAGVFLLVMYVWHYGTLKRYEFELHSKVSMAWILGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHIFRCVARYGYKDLHKKDSSFEKKLFNNLFMFVRLESMMEDCSDSEYSPCEPRSEQSNNNGNTNSLGNGDLTTSSVDLIDTARSLADVNVTFQSSSPCTEVDEYEFLNNSRESGVVHILGNTVVVASRDSRFYKKIAIDYIYAFLRKICRENSVIFNIPHESLLNVGQVFYV* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3392 783 MobiDBLite consensus disorder prediction 1 20 - -
Psa1g3392 783 MobiDBLite consensus disorder prediction 660 678 - -
Psa1g3392 783 MobiDBLite consensus disorder prediction 657 678 - -
Psa1g3392 783 TIGRFAM kup: potassium uptake protein 53 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa1g3392 783 Pfam K+ potassium transporter 55 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa1g3392 783 PANTHER POTASSIUM TRANSPORTER 4 782 - -
Psa1g3392 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 4 782 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3392 Psa-Chr1 296949028 296952519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3392 2 783 Inorganic Solute Cotransporters AT2G35060 74.682 0.0 1162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3392 K03549 - gmx:100801093 1189.48