Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3390 ATGTGGGATTTGGGTCAGAAACTTGACCAACCAATGGACGAGGAAGCAGGAAAGCTCAGAAATATGTATAAACAAAAAAAGTTTTCTGCACTGTTGGTTATACGGCTTGCATATCAGAGTCTCGGCGTAGTTTATGGAGATTTGGGAACTTCTCCATTATACGTTTTTTATAACACGTTTCCTCATGGAGTTAATGATCCAGAGGACGTGATTGGAGCTCTTTCGTTGATCATTTACTCACTTACTCTTGTGCCGCTGCTCAAATATGTTTTTATTGTGTTAAGAGCAAACGACAATGGTCAAGGTGGAACACTGGCTCTTTATTCCTTGCTATGCCGACATGCGAATATAAAGATCATTCCCAACCAGCATCGCACGGATGAAGAGTTAACGACATATAGCCGGACTACAATCCACGAAAGGTCATTTGCTGCGAAAACCCAAAGATGGTTAGAGAGAGGATTTATTAAAAGTATCATTCTTATTCTTGTCCTTGTTGGTACCTGCATGGTCATTGGAGATGGTATTCTTACTCCGGCTATATCTGCCGTTTGTTTTCTCTCCGAACGATCTTCTTGTTCCATTTATTTCTCTTGTTTCTTTAAATGCAAGCTTTCTTTTTATTCATCCAATGAAATTTTCCGATGCAGTTTTATCTGCTGCTGGTGGCATCAGAGTAAACAACCTGAAATCGATAGTGGAGTAGTTGTGATTGTTGCGGTTGTAATATTAGTTGGGCTATTCAGCGTGCAACATTATGGTACAGATGAAGTTGGTTGGCTCTTTGCTCCAATTGTTCTGGTTTGGTTTCTGCTAATTGGAGGCATAGGTATATACAACATTTGGAGATTCGGTGGCAGAGTCCTAAAAGCCTTTTCGCCTCTCTATGTGTATCACTATATAAGAAACGGAAGAAAAGATAGTTGGCTTTCCCTTGGCGGCATCTTGCTCAGCATAACCGGGGCAGAAGCTCTTTTTGCCGACTTAGCCAATTTTCCAGTCTCATCGGTACAAATTGCATTTACTCTTCTTGTGTTTCCTTGCCTTCTTTTAGCATATTCTGGACAGGCGGCTTATCTGGTGCATAACTTGCATCATTCACGAGATGTTTTTTATCGTTCTATTCCAGAAAAAATATATTGGCCTGTATTTGTTATTGCAACACTAGCAGCAATAGTTGCGAGCCAGGCCACAATAACAGCAACCTTTTCAATCATTAAGCAAGCCCTTGCTCATGGCTGTTTCCCAAGAGTCAAAGTTGTTCACACATCGAAAAAGTTCCTTGGCCAGATATATATTCCTGATATCAATTGGATCCTTATGATTCTTTGCATTGCTGTTACTGTCGGCTTTAAAAATCAAAGTCATATTGGAAATGCATATGGCACTGCAGTTGTGTTAGTCATGTTGGTTACAACACTGCTCATGATTTTGGTCATGATATTAGTTTGGCACTGCCATTGGATTCTTGTGATTGCGTTCACCGGCTTATCATTGATTGTGGAATGCACATACTTTTCTGCTGTACTATTCAAAGTCGATCAAGGTGGGTGGGCCCCACTTGCAATTGCCGGAGTTTTTCTGACTGTTATGTATGTTTGGCATTATGGTACAGTGAAGCGCTACGAGTTTGAATTGCGTAGTAAAGTATCAATGGCATGGATTCTCGGACTCGGTCCCAGTTTAGGACTAGTTCGTGTCCCCGGAATCAGCCTAGTCTACACAGAACTTGCAAGTGGAATTCCACATATATTTTCTCATTTTATTACCAACCTACCAGCCATTCATTCTGTCGTTGTTTTCGTCTGTGTGAAGTATCTCCCTGTCTACACCGTCCCGGAAGAAGAACGGTTCCTTGTCAAGCGTATTGGACCAAAGAACTTCCACATTTTTCGATGTGTGGCACGATATGGATATAAAGACCTTCATAAGAAAGACGATGATTTTGAGAAGAAACTCTTTCACAACCTTTTCATGTTTGTTCGACTTGAATACATGATGGAAGATTGCTCTGATTCGGAATGCAGTCCATGTGAACCGCGAACCGAACGGTCGAGAGATTTCACTTTGAATAACAATGGAAACACAACTTCATTGAGTAATGACGTTTTAACAATTTCATCAGTAGACTCAATTGTTCCTGCAAGATCCTCTAGCCATTGCACTGAGGGTGATGAATATGAATTTTTAAATAACGGTAGAGAAGCTGGTGTTGTTCACATTCTAGGAAACACAGTTGTGAGGGCTAATAGGGATTCAAGATTCTACAAGAAAATAGCTGTTGATTATATATATGTATTTCTTAGAAAGATATGCAGGGAAAATAGTGTGATCTTCAATATTCCTCATGAGGGTCTCTTAAATGTTGGTCAAGTTTTCTATGTATAG 2388 0.4024 MWDLGQKLDQPMDEEAGKLRNMYKQKKFSALLVIRLAYQSLGVVYGDLGTSPLYVFYNTFPHGVNDPEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTLALYSLLCRHANIKIIPNQHRTDEELTTYSRTTIHERSFAAKTQRWLERGFIKSIILILVLVGTCMVIGDGILTPAISAVCFLSERSSCSIYFSCFFKCKLSFYSSNEIFRCSFICCWWHQSKQPEIDSGVVVIVAVVILVGLFSVQHYGTDEVGWLFAPIVLVWFLLIGGIGIYNIWRFGGRVLKAFSPLYVYHYIRNGRKDSWLSLGGILLSITGAEALFADLANFPVSSVQIAFTLLVFPCLLLAYSGQAAYLVHNLHHSRDVFYRSIPEKIYWPVFVIATLAAIVASQATITATFSIIKQALAHGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTVGFKNQSHIGNAYGTAVVLVMLVTTLLMILVMILVWHCHWILVIAFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGVFLTVMYVWHYGTVKRYEFELRSKVSMAWILGLGPSLGLVRVPGISLVYTELASGIPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHIFRCVARYGYKDLHKKDDDFEKKLFHNLFMFVRLEYMMEDCSDSECSPCEPRTERSRDFTLNNNGNTTSLSNDVLTISSVDSIVPARSSSHCTEGDEYEFLNNGREAGVVHILGNTVVRANRDSRFYKKIAVDYIYVFLRKICRENSVIFNIPHEGLLNVGQVFYV* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3390 795 PANTHER POTASSIUM TRANSPORTER 1 184 - -
Psa1g3390 795 PANTHER POTASSIUM TRANSPORTER 227 794 - -
Psa1g3390 795 TIGRFAM kup: potassium uptake protein 226 795 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa1g3390 795 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 184 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa1g3390 795 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 227 794 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa1g3390 795 Pfam K+ potassium transporter 228 641 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa1g3390 795 Pfam K+ potassium transporter 38 184 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3390 Psa-Chr1 296901310 296905933 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3390 1 795 Inorganic Solute Cotransporters AT1G31120 70.916 0.0 1110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3390 K03549 - gmx:100776628 1198.73