Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3380 ATGGTGCTACGGTACCTATGCAAGGTTGAACAAAGGGTGAAGGACGTCACCGGTACCTTCCGACTCCGGCGAGACTCCGATGAGCGTTTACCTCAATCCTATATTGTATATTTAGGATCACATTCTTTCGGTTCAAATCCTTCATTACTTGACTCTAAATCTGTCACAAACTCTCACTATGATTTACTTGGATCTTTCCTTGGAAGTACTGAGAAGGCCAAAGAAGCAATATTTTACTCTTACAATAAATATATTAATGGCTTTGCTGCAATACTTGATGAAGATGAAGCAAAAGAGATTGCAAAACATCCAAATGTTGTATCAATGTTTTTAAATAAAAGATATGAACTACATACGACCCGATCGTGGAATTTCCTTGGGTTAGAGACGGACGGTGGATTTGCTAATGACTCAGTATGGAAAAAATCATTGGGTGAAGACATCATTATTGGAAATTTGGACACTGGTGTTTGGCCGGAATCAAAGAGTTTTAGTGATGAAGGGTTTGGGCCAATTCCAAAGAAGTGGAAAGGAATTTGTCAAGTTGCCAAAGGAAATCCAGATAAATTTTATTGCAACAGCGCACGCGACTTCGATGGTCATGGCACACATACTTTATCAACTGCTGGGGGTAATTTTATTGCTGGAGCCAATGTTTTAGGGTTTGGAAATGGAACAGCAAGTGGTGGATCACCAAAAGCAAGAGTTGCAAGCTATAAAATCTGTTGGGATGGATGTGATGAAGCTAATATTTTGGCTGGTTTTGAGGCTGCCATAAGTGACGGTGTTGATGTAATTTCTGTGTCTTTGGGTGGAATTTTTCCACAATTTGGTTCAGGCAATGCTATTTCTGTTGGTTCCTTCCATGCAATTGCCATAAGTGACGGTGTTGATGTATCCCTTTTATGA 909 0.3993 MVLRYLCKVEQRVKDVTGTFRLRRDSDERLPQSYIVYLGSHSFGSNPSLLDSKSVTNSHYDLLGSFLGSTEKAKEAIFYSYNKYINGFAAILDEDEAKEIAKHPNVVSMFLNKRYELHTTRSWNFLGLETDGGFANDSVWKKSLGEDIIIGNLDTGVWPESKSFSDEGFGPIPKKWKGICQVAKGNPDKFYCNSARDFDGHGTHTLSTAGGNFIAGANVLGFGNGTASGGSPKARVASYKICWDGCDEANILAGFEAAISDGVDVISVSLGGIFPQFGSGNAISVGSFHAIAISDGVDVSLL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3380 302 PANTHER BNAC02G33520D PROTEIN 31 184 - -
Psa1g3380 302 PANTHER BNAC02G33520D PROTEIN 190 292 - -
Psa1g3380 302 Gene3D Peptidase S8/S53 domain 147 292 IPR036852 GO:0004252|GO:0006508
Psa1g3380 302 PANTHER PEPTIDASE S8 31 184 - -
Psa1g3380 302 PANTHER PEPTIDASE S8 190 292 - -
Psa1g3380 302 Pfam Subtilase family 145 275 IPR000209 GO:0006508|GO:0008236
Psa1g3380 302 Pfam Peptidase inhibitor I9 33 118 IPR010259 -
Psa1g3380 302 SUPERFAMILY Subtilisin-like 27 279 IPR036852 GO:0004252|GO:0006508
Psa1g3380 302 ProSiteProfiles Serine proteases, subtilase domain profile. 122 302 - -
Psa1g3380 302 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 118 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3380 Psa-Chr1 295137171 295138966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3380 30 299 Subtilisin-like Serine Gene Family AT5G59810 55.743 6.59e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3380 - - vun:114175516 380.563