Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3345 ATGGAATCACCGAGCACTCAGCATACACAAATTATTGAAGTCAGCAGAGATCTTCCTGATGTAGCAAGGAAAATTTGTGGGGAAGCAACATGTGAGTTCTCAGATGCTGGATCCATCTCAAAGGATGCTGAAGAACGATCAACTTCGATGCGGAAGCTTTTGATAGCAGTGATCCTCTGCATTATTTTCATGGCTGTTGAGGTCGTTGGTGGTATTAAGGCTAACAGTCTTGCAATATTGACTGATGCAGCACATTTGCTTTCCGATGTTGCAGCATTTGCCATCTCCTTATTTTCTATATGGGCTGGGGGATGGGAACCGAATCCTCGTCAGTCGTTTGGATTTTTTAGAATAGAGATTCTCGGCGCTTTGGTTTCTATGCAATTAATATGGCTGCTTGCTGGGATTCTTGTATATGAAGCCATTGCTAGACTCATTGCAGGTCCTCAAGATGTGGATGGGTTTTTAATGTTTGTTGTTGCTGCATTTGGTCTTGTGGTTAATATCATTATGGCTTTGGTATTGGGTCATGATCACGGACACGGCCACGGACATGGACATGATCATGGACACGGGCATGATCATCATGGCCACATCCATGGTATTTCAGTTTCTACCAATCATGATATAAAGCAAACACAAGATGAGCATCATCACACTCACCATCATGATGATGAAAAGCATTCAAAAGATGCCCATCACCATACTCATGATGATCACATGCATCCTCATGAGCATGATCACAAAGAGGGTGCTGCACCACTTCTTGGTGAATCAAAAGGCAGACCTGAGAAGAAGAAACGCAACATAAACGTACACGGGGCATATCTCCATGTACTTGGGGATTCTATCCAGAGTGTTGGAGTAATGATTGGCGGAGCAATCATATGGTATAAACCTGAATGGAAAATAGTTGATTTAATTTGCACTCTAATCTTTTCTGTTATTGTTTTGGCCACAACTATCAACATGCTGCGAAACATTTTGGAAGTCCTGATGGAGAGTACGCCGCGTGAGATAGATGCTACTCAACTTCAAAAGGGGCTATTGGAGATGGAAGAAGTAGTGGCTATTCATGAGTTGCACATATGGGCCATTACAGTTGGGAAGGTATTGCTAGCTTGTCATGTTAAAATCAATCCAGAAGCAGATGCGGACGCAATGTTGGACAAAGTTATAGACTACATAAAGAGGGTGCATAACATTAGTCATGTAACTATCCAGATAGAACGCTAG 1236 0.4239 MESPSTQHTQIIEVSRDLPDVARKICGEATCEFSDAGSISKDAEERSTSMRKLLIAVILCIIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQLIWLLAGILVYEAIARLIAGPQDVDGFLMFVVAAFGLVVNIIMALVLGHDHGHGHGHGHDHGHGHDHHGHIHGISVSTNHDIKQTQDEHHHTHHHDDEKHSKDAHHHTHDDHMHPHEHDHKEGAAPLLGESKGRPEKKKRNINVHGAYLHVLGDSIQSVGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLATTINMLRNILEVLMESTPREIDATQLQKGLLEMEEVVAIHELHIWAITVGKVLLACHVKINPEADADAMLDKVIDYIKRVHNISHVTIQIER* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3345 411 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 340 410 IPR036837 -
Psa1g3345 411 MobiDBLite consensus disorder prediction 210 249 - -
Psa1g3345 411 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 411 - -
Psa1g3345 411 Gene3D Cation efflux protein transmembrane domain 49 332 IPR027469 -
Psa1g3345 411 Pfam Cation efflux family 53 333 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Psa1g3345 411 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 334 IPR027469 -
Psa1g3345 411 TIGRFAM CDF: cation diffusion facilitator family transporter 50 411 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Psa1g3345 411 PANTHER METAL TOLERANCE PROTEIN A1 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3345 Psa-Chr1 292855184 292859253 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3345 1 411 Inorganic Solute Cotransporters AT2G46800 67.064 3.29e-177 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3345 K14689 - gmx:100790458 569.311