Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3322 ATGAGTTTTCACTATCAGTTTCCTGATTCTCCTCCTTCTTTTTACACTTCATCTGACGATTTTAATAGACAAGCTCAAACAACTTTTGACAGATTCGGTGACACCGTTGATTCTTCTATGAAATGGGCTGTAGCAGAATCTATAGTATATGGAATAGTGGTAATAATAGCTGTTATCGCAATAGTGTATGCTATTATAGAGTGCTTGAAGAAAGCAGGAACAGCAATTCCCGCTTACACTCAGATTTCAACAACAGAAAAAGATAATCAAGTATTTTCAAACTCTTCATTCCCTTCAACCAGCGAAATCGAAGTTATTATAGCACAAGATTCAGAAGCTGAATTTCCAACCATGGAGAGATTCTTAAGCAACATCAATAGAGAAAAACCAATCAGATTCACACCCGAGAAGCTCGAGGAGATCACAAAAAGCTACTCAACCATATTAGGTTCTGGTGCTTTCGGTGTTGTCTTCAAAGGAGAGTTATCGAATGGAGAAAATGTTGCTGTCAAAGTTCTCAACTGTTTGGACATGGGAATGGAAGAGCAATTCAAAGCCGAAGTTAGCACGATCGGAAGAACTTACCATATCAATTTAGTCAAGCTTTATGGATTTTGTTTTCACCATGACACCAAGGCCCTTGTTTACGAGTGCGTTGAGAATGGTTCGCTAGATAAGTACTTGTTTGGAAGCACGAACCGCGACGTTGAGTTACAAAAGCTTCGTGAGATTGCTATTGGAACGGCTAAAGGAATCGCGTATTTACACGAGGAATGTCAGCATAGGATAATACATTATGATATCAAACCAGAAAATGTTCTTCTTGACATGAAATTAGTACCGAAGATAGCGGATTTTGGATTGGCGAAGTTAAGAAATAGAGAAAGTAACAACACTGTAATAATAAATACTCACTTTAGAGGAACAAGAGGTTACGCTGCACCGGAGTTATGGAAGGCTTATCCGGTGACATACAAGTGCGATGTTTATAGTTTTGGTATTCTGCTGTTTGAAATTGTAGGGAGAAGAAGGCATTTTGATTCTAGCTATAGTGAATCGCAACAATGGTTTCCGAAATGGACGTGGGAAATGTTTGAGAACAATGAATTGGTTGTTATGCTCGCGCTTTGTGGAATTGAAGAGAAGGATAATGAGATTGCTGAGAGAATGTTAAAGGTTGCTCTATGGTGTGTTCAGTATTCACCAAATGATAGGCCTCTGATGAGTACTGTGGTGAAGATGTTAGAGGGTGAAATCGAAATTTCACCACCTCCATTTCCCTTCCATAATCTTGTTCCTGATAAGCAAAATTTGACATCAGAGGGAAGTGATGCGGATTCGGATACTACTGCGTCGTCGTGGAATACTGAATCTATTAGAGAATGTTTTGGAACCAAACACAATAGGTTTGAGATTGAAAAAGCTACATAG 1431 0.3892 MSFHYQFPDSPPSFYTSSDDFNRQAQTTFDRFGDTVDSSMKWAVAESIVYGIVVIIAVIAIVYAIIECLKKAGTAIPAYTQISTTEKDNQVFSNSSFPSTSEIEVIIAQDSEAEFPTMERFLSNINREKPIRFTPEKLEEITKSYSTILGSGAFGVVFKGELSNGENVAVKVLNCLDMGMEEQFKAEVSTIGRTYHINLVKLYGFCFHHDTKALVYECVENGSLDKYLFGSTNRDVELQKLREIAIGTAKGIAYLHEECQHRIIHYDIKPENVLLDMKLVPKIADFGLAKLRNRESNNTVIINTHFRGTRGYAAPELWKAYPVTYKCDVYSFGILLFEIVGRRRHFDSSYSESQQWFPKWTWEMFENNELVVMLALCGIEEKDNEIAERMLKVALWCVQYSPNDRPLMSTVVKMLEGEIEISPPPFPFHNLVPDKQNLTSEGSDADSDTTASSWNTESIRECFGTKHNRFEIEKAT* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3322 476 Gene3D Phosphorylase Kinase; domain 1 117 218 - -
Psa1g3322 476 PANTHER RUST RESISTANCE KINASE LR10-RELATED 98 435 IPR045874 GO:0004672
Psa1g3322 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Psa1g3322 476 PANTHER OSJNBB0022F16.11 PROTEIN 98 435 - -
Psa1g3322 476 SMART serkin_6 143 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g3322 476 Pfam Protein kinase domain 147 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g3322 476 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Psa1g3322 476 SUPERFAMILY Protein kinase-like (PK-like) 123 416 IPR011009 -
Psa1g3322 476 Gene3D Transferase(Phosphotransferase) domain 1 219 422 - -
Psa1g3322 476 ProSiteProfiles Protein kinase domain profile. 143 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3322 Psa-Chr1 291365366 291367555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3322 132 455 Receptor kinase-like Gene Family AT5G38280 39.881 4.92e-79 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Psa1g3322 Pkinase 5.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3322 - - gmx:100820269 649.432