Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g3322 | ATGAGTTTTCACTATCAGTTTCCTGATTCTCCTCCTTCTTTTTACACTTCATCTGACGATTTTAATAGACAAGCTCAAACAACTTTTGACAGATTCGGTGACACCGTTGATTCTTCTATGAAATGGGCTGTAGCAGAATCTATAGTATATGGAATAGTGGTAATAATAGCTGTTATCGCAATAGTGTATGCTATTATAGAGTGCTTGAAGAAAGCAGGAACAGCAATTCCCGCTTACACTCAGATTTCAACAACAGAAAAAGATAATCAAGTATTTTCAAACTCTTCATTCCCTTCAACCAGCGAAATCGAAGTTATTATAGCACAAGATTCAGAAGCTGAATTTCCAACCATGGAGAGATTCTTAAGCAACATCAATAGAGAAAAACCAATCAGATTCACACCCGAGAAGCTCGAGGAGATCACAAAAAGCTACTCAACCATATTAGGTTCTGGTGCTTTCGGTGTTGTCTTCAAAGGAGAGTTATCGAATGGAGAAAATGTTGCTGTCAAAGTTCTCAACTGTTTGGACATGGGAATGGAAGAGCAATTCAAAGCCGAAGTTAGCACGATCGGAAGAACTTACCATATCAATTTAGTCAAGCTTTATGGATTTTGTTTTCACCATGACACCAAGGCCCTTGTTTACGAGTGCGTTGAGAATGGTTCGCTAGATAAGTACTTGTTTGGAAGCACGAACCGCGACGTTGAGTTACAAAAGCTTCGTGAGATTGCTATTGGAACGGCTAAAGGAATCGCGTATTTACACGAGGAATGTCAGCATAGGATAATACATTATGATATCAAACCAGAAAATGTTCTTCTTGACATGAAATTAGTACCGAAGATAGCGGATTTTGGATTGGCGAAGTTAAGAAATAGAGAAAGTAACAACACTGTAATAATAAATACTCACTTTAGAGGAACAAGAGGTTACGCTGCACCGGAGTTATGGAAGGCTTATCCGGTGACATACAAGTGCGATGTTTATAGTTTTGGTATTCTGCTGTTTGAAATTGTAGGGAGAAGAAGGCATTTTGATTCTAGCTATAGTGAATCGCAACAATGGTTTCCGAAATGGACGTGGGAAATGTTTGAGAACAATGAATTGGTTGTTATGCTCGCGCTTTGTGGAATTGAAGAGAAGGATAATGAGATTGCTGAGAGAATGTTAAAGGTTGCTCTATGGTGTGTTCAGTATTCACCAAATGATAGGCCTCTGATGAGTACTGTGGTGAAGATGTTAGAGGGTGAAATCGAAATTTCACCACCTCCATTTCCCTTCCATAATCTTGTTCCTGATAAGCAAAATTTGACATCAGAGGGAAGTGATGCGGATTCGGATACTACTGCGTCGTCGTGGAATACTGAATCTATTAGAGAATGTTTTGGAACCAAACACAATAGGTTTGAGATTGAAAAAGCTACATAG | 1431 | 0.3892 | MSFHYQFPDSPPSFYTSSDDFNRQAQTTFDRFGDTVDSSMKWAVAESIVYGIVVIIAVIAIVYAIIECLKKAGTAIPAYTQISTTEKDNQVFSNSSFPSTSEIEVIIAQDSEAEFPTMERFLSNINREKPIRFTPEKLEEITKSYSTILGSGAFGVVFKGELSNGENVAVKVLNCLDMGMEEQFKAEVSTIGRTYHINLVKLYGFCFHHDTKALVYECVENGSLDKYLFGSTNRDVELQKLREIAIGTAKGIAYLHEECQHRIIHYDIKPENVLLDMKLVPKIADFGLAKLRNRESNNTVIINTHFRGTRGYAAPELWKAYPVTYKCDVYSFGILLFEIVGRRRHFDSSYSESQQWFPKWTWEMFENNELVVMLALCGIEEKDNEIAERMLKVALWCVQYSPNDRPLMSTVVKMLEGEIEISPPPFPFHNLVPDKQNLTSEGSDADSDTTASSWNTESIRECFGTKHNRFEIEKAT* | 477 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g3322 | 476 | Gene3D | Phosphorylase Kinase; domain 1 | 117 | 218 | - | - | |
Psa1g3322 | 476 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 98 | 435 | IPR045874 | GO:0004672 | |
Psa1g3322 | 476 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 263 | 275 | IPR008271 | GO:0004672|GO:0006468 | |
Psa1g3322 | 476 | PANTHER | OSJNBB0022F16.11 PROTEIN | 98 | 435 | - | - | |
Psa1g3322 | 476 | SMART | serkin_6 | 143 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g3322 | 476 | Pfam | Protein kinase domain | 147 | 413 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g3322 | 476 | ProSitePatterns | Protein kinases ATP-binding region signature. | 149 | 171 | IPR017441 | GO:0005524 | |
Psa1g3322 | 476 | SUPERFAMILY | Protein kinase-like (PK-like) | 123 | 416 | IPR011009 | - | |
Psa1g3322 | 476 | Gene3D | Transferase(Phosphotransferase) domain 1 | 219 | 422 | - | - | |
Psa1g3322 | 476 | ProSiteProfiles | Protein kinase domain profile. | 143 | 432 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g3322 | Psa-Chr1 | 291365366 | 291367555 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g3322 | 132 | 455 | Receptor kinase-like Gene Family | AT5G38280 | 39.881 | 4.92e-79 | 257 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-Os | Psa1g3322 | Pkinase | 5.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g3322 | - | - | gmx:100820269 | 649.432 |