Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3313 GGTTGTGACGCATCAATTTTACTTAGTGAAGGAGAGAGAAATCATCCTGATGATATTTCATTAGCTGGTGATGGTTTTGACACCGTGATTAAAGCCAAAGAAGCTATTGAGAGTGATCCTCAATGCACAGACAAAGTCTCTTGTGCTGATATACTTGCTCTTGCTACAAGGGATGTTGTCAATTTGACTGGGGGACCATTTTATGAAGTGGAATTGGGAAGACGTGATGGAAAGATATCTACAATTGCAAGTGTTCAACATAAACTTCCTCATCCTGAATTCAATTTGGATCAACTCAATTCAATGTTTAGTTTCAATGGACTCTCTCAGATAGATATGATTGCATTATCAGGTGCACATACAATTGGATTTTCACACTGCAGCCGTTTCTCAAAAAGAATCTACAACTTCAGCCCAACAACTAAAATCGACCCAACACTAAATCTACAATATGCCTTTCAGCTAAGACAAGCATGTCCTCCAAAAGTTGATCCTAGGATTGCCATAAACATGGATCCTATCACACCTCAGAAATTCGACAACCAATATTTCAAGAACTTGCAACAAGGAAAAGGACTTTTTACTTCTGATCAAGTGTTGGCTATAGATGAAAAGTCAAAGGACACGGTTGACTTGTTTGCATCAAATGAAGTAGCTTTTGAAAGTGCTTTTATTGATGCTATAACTAAGTTGGGAAGGGTAGGTGTTAAAACTGGAAATCAAGGTGAAATAAGGTTTGATTGTACAAAGCCAAAGGTGAATTAA 765 0.3765 GCDASILLSEGERNHPDDISLAGDGFDTVIKAKEAIESDPQCTDKVSCADILALATRDVVNLTGGPFYEVELGRRDGKISTIASVQHKLPHPEFNLDQLNSMFSFNGLSQIDMIALSGAHTIGFSHCSRFSKRIYNFSPTTKIDPTLNLQYAFQLRQACPPKVDPRIAINMDPITPQKFDNQYFKNLQQGKGLFTSDQVLAIDEKSKDTVDLFASNEVAFESAFIDAITKLGRVGVKTGNQGEIRFDCTKPKVN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3313 254 ProSiteProfiles Plant heme peroxidase family profile. 1 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 CDD secretory_peroxidase 1 250 IPR033905 GO:0004601|GO:0042744
Psa1g3313 254 SUPERFAMILY Heme-dependent peroxidases 1 250 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Plant peroxidase signature 24 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Plant peroxidase signature 45 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Plant peroxidase signature 64 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Plant peroxidase signature 111 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Plant peroxidase signature 170 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Plant peroxidase signature 186 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Plant peroxidase signature 226 239 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 ProSitePatterns Peroxidases proximal heme-ligand signature. 112 122 IPR019793 -
Psa1g3313 254 Gene3D Peroxidase, domain 2 90 231 - -
Psa1g3313 254 PANTHER PEROXIDASE 16-RELATED 1 251 - -
Psa1g3313 254 Gene3D - 1 249 - -
Psa1g3313 254 PRINTS Haem peroxidase superfamily signature 46 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Haem peroxidase superfamily signature 64 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Haem peroxidase superfamily signature 112 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PRINTS Haem peroxidase superfamily signature 172 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 Pfam Peroxidase 1 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3313 254 PANTHER - 1 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3313 Psa-Chr1 290771945 290773553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3313 1 250 Peroxidase AT2G18980 73.705 1.08e-136 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3313 K00430 - gmx:100804620 432.565