Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3202 ATGGGGGTGGTTTTGCCACTGATTCTGTTTCTGGTGAAGCTTTGTATTATGCAAGGATCTGAAGGGTTTGTTATATCCCCATCTCCAGCATTTCTTCCTTCTGTTCATCATGATGGAGAAGCACCTGTTCCTATCCATAATGGAGAGTCATGGAGAAGGAATGCATCAAGCCCTTCAGATCCACTTGGGTCTGTTATATCGCCATCCCCAACAACATTACCTGTGGCTCTTTCCCCTAGTGAAGCACCTAATCTCTTAGGTCCAAATGGGTCTTTTGTGCAACCTCCAGCTGCACTACCACCTTCTTCATCAGCTCCAACCCCTCAGAAGATTACCGGAATTGAATCATCCATATCACCTAGTTCTAGTCCAAGCAATGAATCTCCACCGTATAAGGCTGTTCCAGCACCATCAACTGCTGAAAGGAATTTTCCACCATCCATGCAGCCAATTCCATCTCAAAGGAAAGAACCCGCTTTTAGTCCTCTTATATCCACACCAATTTCTCCAGCTTTTGTTGCAATGCCTCCTGAAAATTTGCCTAAAACTTCACCTATCAGTCAACCAATTGAACATGGAAGTTTGCCTCCTAACTCTAAGGTTGATAAGAGGAACGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACCAGGTTCTTTCTTGCAACCTCCAGTTGCATTACCACCTAATGCATTAGCTCCAACTCCTCAGAAGATTAAAGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAACATCAAATCGTTATCGCCGCCATATAAGGCTGCTCCTGCACCATCAACTGTTGAAAGGAATTTGCCACCATCGTTGCAACCAATTCCACCTCGAATGAAAGCACCTATTGTCAGGCCTCCTGTATCCATACCAATTGCTCCAGCTCCTTTTGCAATACCTTCTGGAAATTTGTCTATAAATTCACCTATCAGCCAACCAATTGAGCATGGAAGTTTTCCTCCTAGGGTTGATAGGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCAACAGCCCCACTTGCAACACCTTCTACCGATGTGCCCAAAACTTCACCATTAAGCCCTTCAACTGATAATGGAAGTTTCCCTCCTAATTCTCATAGAGAGGGTACACCTACAAATAAAGGTCACACTCCAGAAACAATTTCACCAGCTCCTGTATTCAATTTGCCAAAATATTCGCCAGTGAATCAACCGACTGAACCTGGAATTTTGCCTCCAACTGTCCATAAAAGGAACTCCAGCATCAGTCACACATTGGAGCCAGTTTCGCAGGCCCCGGTTGCAGAACCCCCTACAAGTTTTCCAAAAAGTTCACCAGTCAGCCAACCAACTCGTAATGGAAGTTTTCCACCTAATGTTCATGATAGAACTGTACATAAGGGACACATTCATACAGCAGAGCCAGTAATGCCACCAGTAGTTACATCACCAACAAGTACATTTCCAGGAGATCCACCATCAGTCCACCAAGTCATACCTGCAACATCTCCATCTGAACTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCCAGAAGCTTCAAAGGGAAGAACGGTGGAGAACCTGTTTCTGCGCCTTTGTACAAAACACCGAAGTCACCACCAACTTTAGTTCATTCCCCTGCTCAAGCTCCTTCTCCTTCTGAACATAAAGCAAGGCCATCACATCATGCTCCTGAGCCACTTATTTCACCTCCTAAATCTCCTTTCAACAAAGAAGATCATTCTCCTGCATCTCCACCTTCTACTGCATTTTATAAGCATCAGCGTACACGGAATACGATAACCAGCCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCCTCATTTCTTCCAACAAGTAGGCGGAGACATTATGCTCCGCCACCAATGAACACAGGTTCTGCAGATTCTCCATTTACCTTCCCTATCCAATCACCAGTGAGTCAGGTTTCACCTGCTCCTTCTCCATCATTCAAGATTTCCCCTCATTCAACCAAAATTCCATTTCATCCTCCTGACATATCTCCTTCAAGGCCTTTTTCGAAGAGCCCTAAGAAGCCAATATTGCCTCGAGTTCAAGCATTGCCACCCCCACCTCCTAATGAAGATTGCATATCATATATTTGCTCGGAGCCTTATACGAATTCTCCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGGCTCAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCGGAGCTTGCTTCTGAAATAGCCAGCGGAGTTTTCATGAAACTAAGTCAAGTTCGAATTATGGGGGCCAATGCAGCAACTGAGCAGCCAGATAAAACTGATGCTCTCATTGATTTTGTACCACTTGGAGAACAATTTGACAACACTACAGCCTTTTTAACTTCTGAGAGGTTTTGGCATAAACAAGTTGCTATAAAAGCTTCTTACTTTGGAGATTATGAAGTGTTATATGTAAGCTATCCAGGCTTGCCTCCATCTCCTCCATTACCACCTTCAAGCGTTAACATGATAGATGGTGGTCCATATTCAAATAATGGCAATAATGGCAGGACAATAAAACCTCTCGGGGTTGACATACAAAAGAAGCAACATAAAAGTGGACTTAGCAAAGGCATTATAGCTATTATTGTCCTTTCAGCTTTTCTAGCGATTGTTTTATGCTCTGCTGCTGTTTTCACCTTATTCAAGTTCAGAGATCATGTGCCTGATTCTCAACCAACATCAACCCCACGGGGTTTTCCGCCGGCTCATGCCAAAGCATCAGGTACTGCTGGGCCATCAGTTGGAGGTGCAGTTACTTCCGCTTCAACATCATTTCGGTCTAGCATTGCTGCTTACGCAGGATCTGCTAAGACTTTCAGTATGAATGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGCCTTGTTTATAGATGTGACCTTGAAGATGGGTCAAAAGTAGCAGTCAAAGTTCTAAAGAGGGAGGATCATCATGGCGATCGTGAATTCTTATCTGAAGTTGAAATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGTTGATTGGAATATGTACAGAACTCAGCTCCCGCTGTCTGGTTTACGAACTCATTCCAAATGGCAGCGTGGAATCTCACTTACATGGAGTTGACAGGGAAAAAAACCCACTTGACTGGAGTACTCGGGTAAAGATAGCACTTGGTGCTGCTCGTGGTCTTGCTTATTTGCATGAAGATTCAAGTCCACATGTCATACATAGGGACTTCAAATCTAGCAATATCTTGCTGGAAAACGATTTTACACCTAAAGTATCTGATTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAACAGGCACATATCTACACGTGTTATGGGAACTTTCGGATATGTGGCTCCCGAGTATGCAATGACTGGGCATCTTCTCGTGAAGAGTGATGTATACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACCGGAAGAAAACCAGTGGACTTTTCCCAACCGCCTGGTCAAGAGAATCTCGTTGCTTGGGCTCGTCCCCTTCTAACAAGTAGAGAAGGACTTGAAGCAATAATCGATCCATCTCTAGGAACCAATGTTCCTTTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCTGATCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTGAAACTTGTGTGTAATGAATGCGATGAAGCAAAAGAAGTGGGTTCAACAAGTTCTAGCAAAGATGATTTATCTTCTGATTTCAATGCTGCTTCTGAACAACTACCCAATAATTTCCAAAGCCATTTCGCAGCAGGTAACTACAATTTCGGAGTTGATATTGAAAATGGATTGTCAGCATCAGAGATATTCAGCTCATCAGCAAGATTTGGAAGGCAAGCATCTGAATCATTTAGAAGACATTCATATTCAGGTCCTCTAAGAACCGTAAGAAGCAAGCGGTTATGGCAGATAATTCGAAAGGTTTCTGGCGGTAGTGTCAGTGAACACGGGGATATGTTCAAGTAA 4122 0.4374 MGVVLPLILFLVKLCIMQGSEGFVISPSPAFLPSVHHDGEAPVPIHNGESWRRNASSPSDPLGSVISPSPTTLPVALSPSEAPNLLGPNGSFVQPPAALPPSSSAPTPQKITGIESSISPSSSPSNESPPYKAVPAPSTAERNFPPSMQPIPSQRKEPAFSPLISTPISPAFVAMPPENLPKTSPISQPIEHGSLPPNSKVDKRNESKSHNLEPVSPGSFLQPPVALPPNALAPTPQKIKGIESSISPSPSPNIKSLSPPYKAAPAPSTVERNLPPSLQPIPPRMKAPIVRPPVSIPIAPAPFAIPSGNLSINSPISQPIEHGSFPPRVDRRNESKSHNLEPVSTAPLATPSTDVPKTSPLSPSTDNGSFPPNSHREGTPTNKGHTPETISPAPVFNLPKYSPVNQPTEPGILPPTVHKRNSSISHTLEPVSQAPVAEPPTSFPKSSPVSQPTRNGSFPPNVHDRTVHKGHIHTAEPVMPPVVTSPTSTFPGDPPSVHQVIPATSPSELPAPVISPSLTPSRSFKGKNGGEPVSAPLYKTPKSPPTLVHSPAQAPSPSEHKARPSHHAPEPLISPPKSPFNKEDHSPASPPSTAFYKHQRTRNTITSPAPASSYFVSPPTSKHQDQPIPPSFLPTSRRRHYAPPPMNTGSADSPFTFPIQSPVSQVSPAPSPSFKISPHSTKIPFHPPDISPSRPFSKSPKKPILPRVQALPPPPPNEDCISYICSEPYTNSPPGVPCMCVWPMRVGLRLSVPLYTFFPLVSELASEIASGVFMKLSQVRIMGANAATEQPDKTDALIDFVPLGEQFDNTTAFLTSERFWHKQVAIKASYFGDYEVLYVSYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIIVLSAFLAIVLCSAAVFTLFKFRDHVPDSQPTSTPRGFPPAHAKASGTAGPSVGGAVTSASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYRCDLEDGSKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELSSRCLVYELIPNGSVESHLHGVDREKNPLDWSTRVKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEAIIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEVGSTSSSKDDLSSDFNAASEQLPNNFQSHFAAGNYNFGVDIENGLSASEIFSSSARFGRQASESFRRHSYSGPLRTVRSKRLWQIIRKVSGGSVSEHGDMFK* 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3202 1373 Gene3D Phosphorylase Kinase; domain 1 958 1061 - -
Psa1g3202 1373 ProSitePatterns Protein kinases ATP-binding region signature. 992 1014 IPR017441 GO:0005524
Psa1g3202 1373 MobiDBLite consensus disorder prediction 472 638 - -
Psa1g3202 1373 SUPERFAMILY Protein kinase-like (PK-like) 967 1259 IPR011009 -
Psa1g3202 1373 MobiDBLite consensus disorder prediction 174 220 - -
Psa1g3202 1373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1108 1120 IPR008271 GO:0004672|GO:0006468
Psa1g3202 1373 Gene3D Transferase(Phosphotransferase) domain 1 1062 1284 - -
Psa1g3202 1373 MobiDBLite consensus disorder prediction 240 280 - -
Psa1g3202 1373 MobiDBLite consensus disorder prediction 115 160 - -
Psa1g3202 1373 MobiDBLite consensus disorder prediction 510 524 - -
Psa1g3202 1373 PANTHER OS01G0750732 PROTEIN 534 1373 - -
Psa1g3202 1373 ProSiteProfiles Protein kinase domain profile. 986 1262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g3202 1373 MobiDBLite consensus disorder prediction 927 947 - -
Psa1g3202 1373 CDD STKc_IRAK 992 1260 - -
Psa1g3202 1373 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 534 1373 - -
Psa1g3202 1373 MobiDBLite consensus disorder prediction 339 388 - -
Psa1g3202 1373 MobiDBLite consensus disorder prediction 585 631 - -
Psa1g3202 1373 MobiDBLite consensus disorder prediction 115 129 - -
Psa1g3202 1373 Pfam Protein tyrosine and serine/threonine kinase 989 1259 IPR001245 GO:0004672|GO:0006468
Psa1g3202 1373 MobiDBLite consensus disorder prediction 314 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3202 Psa-Chr1 281830887 281842951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3202 240 1369 Receptor kinase-like Gene Family AT5G56890 50.130 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Psa1g3202 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3202 - - ccaj:109805519 1645.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3202 1 281830887 281842951 Psa1g3202 1 281830887 281842951 ECH