Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3182 ATGAAAACCTCATTGAGTCCAGATTTTTATAGGACAACATGCCCTGATCTTTGGACAATAGTTAGGCGCGAGGTTTTGAATGCAATTGAAGATGAGATTCGAATGGCTGCTTCGTTGCTTCGCCTTCATTTCCATGATTGCTTTGTAAATGGTTGTGATGGTTCAATTCTGTTGGACGGAGACGAGGAAAAAAATATTACTTCCAAGTTTGATAACGTCGGTCTCAATCTCAAAGACGTTGTTACATTATCAGGTGCTCACACTATTGGACGAGCAAGGTGCACATTTTTTAGCAACAGATTGTTCAATTTCTCGGGGACAGAAGAACCGGACAATACTTTAGAATCCGAGATGCTCTTTGAATTGCAAAATTTGTGTCTACAAGATGAAGATGGGAACGCAACTACGGTTCTAGATTCGAATTCATTTGATCAATTTGATAGCAATTACTTCGAGAATTTGGTAAATGGGAAGGGTCTTCTAAGCTCTGATCAGATTCTGTTTTCAAGTGATGAAGAGGTTACTTCAACCACTAAACAATTGGTCCAATTATACAGTGAGAATGAAAGAATGTTCTTTATGGAATTTGCTTATGCTATGATTAAGATGGGGAATATTAATCCACTTATTGGTTCTGAGGGAGAGATTAGGAATAATTGCAGGGTGATTAATTCTTAA 678 0.3776 MKTSLSPDFYRTTCPDLWTIVRREVLNAIEDEIRMAASLLRLHFHDCFVNGCDGSILLDGDEEKNITSKFDNVGLNLKDVVTLSGAHTIGRARCTFFSNRLFNFSGTEEPDNTLESEMLFELQNLCLQDEDGNATTVLDSNSFDQFDSNYFENLVNGKGLLSSDQILFSSDEEVTSTTKQLVQLYSENERMFFMEFAYAMIKMGNINPLIGSEGEIRNNCRVINS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3182 225 SUPERFAMILY Heme-dependent peroxidases 5 224 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PANTHER PEROXIDASE 63 223 - -
Psa1g3182 225 PANTHER PEROXIDASE 5 63 - -
Psa1g3182 225 Pfam Peroxidase 65 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 Pfam Peroxidase 21 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PRINTS Haem peroxidase superfamily signature 12 29 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PRINTS Haem peroxidase superfamily signature 79 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PRINTS Haem peroxidase superfamily signature 139 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 Gene3D - 8 64 - -
Psa1g3182 225 ProSitePatterns Peroxidases active site signature. 36 47 IPR019794 GO:0004601
Psa1g3182 225 ProSitePatterns Peroxidases proximal heme-ligand signature. 79 89 IPR019793 -
Psa1g3182 225 ProSiteProfiles Plant heme peroxidase family profile. 4 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PANTHER PEROXIDASE 72-RELATED 63 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PANTHER PEROXIDASE 72-RELATED 5 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 CDD secretory_peroxidase 5 223 IPR033905 GO:0004601|GO:0042744
Psa1g3182 225 PRINTS Plant peroxidase signature 11 21 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PRINTS Plant peroxidase signature 78 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PRINTS Plant peroxidase signature 153 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 PRINTS Plant peroxidase signature 198 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3182 225 Gene3D - 204 224 - -
Psa1g3182 225 Gene3D Peroxidase, domain 2 65 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3182 Psa-Chr1 280415162 280416458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3182 66 224 Peroxidase AT5G19890 57.233 7.08e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3182 K00430 - gmx:100817622 220.32