Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3162 ATGGCTTTAGCCATTTCATCCACTTTATCAAGTTTTCCAAACAGAGAAATATGTCAAAAGGTTTTATACCAAGGAACAGCAACAACTTCATGGTTAAGTAGAAGAAGAACACTTACGATTAGGAATGCGAAAAAAGGTGTGTCGGATTTGTGTGTACCACTTCCTCCAGATAGACCATTGTGGTTTCCTGGTAGTTCACCTCCTGAATGGCTTGATGGCAGTATTCCTGGTGATTTTGGTTTTGACCCTCTTGGATTAGGCTCTGATCCAGAGTTACTAAAATGGTTTGCGCAAGCAGAACTAGTACATGGAAGATGGGCAATGTTAGGAGTATCGGGAATCCTAATCCCCGAAATACTCGAAGGAATGGGCTATGTAAAAAACTTCTCATGGTACAATGCAGGTTCAGTACACTATTTCGCAGACCCGGTAACACTATTCATTGTCCAACTAGCTTTAATGGGCTGGGCTGAAGGTAGAAGATGGGCCGATATCGTCAACCCGGGGAGCGTTGATATCGAGCCCAAGCTTCCAAACAGACCTAACCCAAAACCAGATGTTGGTTATCCCGGTGGGCTTTGGTTTGATCCTATGCAGTGGGGAAGAGGGTCACCCGAGCCTGTTATGGTTTTGAGGACTAAAGAGATTAAAAATGGAAGACTTGCTATGCTTGCTTTTGTTGGATTTTGTTTTCAAGCTGTTTATGTTGGAGATAGTCCTATTCAGAATCTGATGGCTCATCTTGCTGATCCGGGTCATTGCAACATTTTCTCGGCTTTCACTTCAAGGTAG 792 0.4343 MALAISSTLSSFPNREICQKVLYQGTATTSWLSRRRTLTIRNAKKGVSDLCVPLPPDRPLWFPGSSPPEWLDGSIPGDFGFDPLGLGSDPELLKWFAQAELVHGRWAMLGVSGILIPEILEGMGYVKNFSWYNAGSVHYFADPVTLFIVQLALMGWAEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYVGDSPIQNLMAHLADPGHCNIFSAFTSR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3162 263 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Psa1g3162 263 Gene3D Chlorophyll a/b binding protein domain 68 253 - -
Psa1g3162 263 SUPERFAMILY Chlorophyll a-b binding protein 57 262 - -
Psa1g3162 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 260 IPR001344 GO:0009765|GO:0016020
Psa1g3162 263 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3162 Psa-Chr1 277828580 277830331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3162 51 263 Chloroplast and Mitochondria Gene Families AT3G61470 65.258 3.75e-101 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3162 K08908 - gmx:100800374 432.18