Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3149 AGAAACTCTGTCAAATGGCTTTTGACATTCGTAGAGAAAATAGTCCAACACCATTTATTGAAGAAGCAGCTGATAGGAGGCTCATGGGTTTAGGAGTAAACAGTAACAATTTGGGGCTTAGTTTAGTTTCGACAACCAAGTGCTTACGCTCCTTGTCTTTTAGCTCTTCTGCTCCTTCTCTTAATTTCAGACTTTTCATATGGGAAGCAGAGAGCAGCTCATGTGATGTTGGCTCTGCAGAAAGACCAATTGACACCATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATCTAGATGTTGAATCTGGAAAGCTGAGTGATAGTGACGAGACAGTTATTAGGCAATTTAGTGGAAGATTTCGTCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCAGAAGATGATATAGTTATTCCAGCATTAGAATCCAATGAGGCCCTTCACAATGTGAGCCATTCATACATCCTTGCAGTTGACCCATATGACAGGGATTTGATTGATAGCAATATTGGAACTTCTTATACAAATGATAATGATGGTGTCAAGAAGTATAACGAACTTGCAACAAAGCTTCAGGGGATGTGCAAATCCATAAGAGTGACCCTGGATCAACATATTTTTAGGGAAGAGTGTGAACTGTGGCCATTGTTTGGGAAACATTTCACTATGGAAGAACAAGATAATATAGTAGGCCGGATAATTGGAACTACAGGTGCTGAAGTTCTCCAGGCAATGTTACCTTCGACTGAACTTGAGTCAGAGATTCTGAAGGTTTATCGCGATTCGACTCTTAATCCAAGGAGAAAGGCATATCTTGTGCAGAATCTTTTGACAAGTCATTGGATAGCTTCCCAGCAGAAATCACCTAAAGCTCCATCTGAAGAAGGATCATCAAATGGTGTTGAAATAGAAGGACACTCACCATCATTTAGGGACCCTAGGAAACTTGTACTTAGGTGTGAGCACTATAAGAGAGATTGCAAGCGGTCTTACAAATCTGTCAAGTATCTATGA 1025 0.398 KLCQMAFDIRRENSPTPFIEEAADRRLMGLGVNSNNLGLSLVSTTKCLRSLSFSSSAPSLNFRLFIWEAESSSCDVGSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDSDETVIRQFSGRFRLLWGLYRAHSNAEDDIVIPALESNEALHNVSHSYILAVDPYDRDLIDSNIGTSYTNDNDGVKKYNELATKLQGMCKSIRVTLDQHIFREECELWPLFGKHFTMEEQDNIVGRIIGTTGAEVLQAMLPSTELESEILKVYRDSTLNPRRKAYLVQNLLTSHWIASQQKSPKAPSEEGSSNGVEIEGHSPSFRDPRKLVLRCEHYKRDCKRSYKSVKYL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3149 340 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 252 331 - -
Psa1g3149 340 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 166 250 - -
Psa1g3149 340 PANTHER CHY ZINC FINGER PROTEIN 252 331 - -
Psa1g3149 340 MobiDBLite consensus disorder prediction 287 313 - -
Psa1g3149 340 Pfam Hemerythrin HHE cation binding domain 82 219 IPR012312 -
Psa1g3149 340 CDD Hr-like 84 218 - -
Psa1g3149 340 Gene3D nmb1532 protein domain like 78 258 - -
Psa1g3149 340 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 29 160 - -
Psa1g3149 340 PANTHER CHY ZINC FINGER PROTEIN 166 250 - -
Psa1g3149 340 MobiDBLite consensus disorder prediction 287 307 - -
Psa1g3149 340 PANTHER CHY ZINC FINGER PROTEIN 29 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3149 Psa-Chr1 277008776 277010311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3149 253 331 C2H2 Transcription Factor Family AT3G18290 64.557 1.85e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3149 K16276 - gmx:100801725 343.199