Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3139 ATGGCTTCAAGATCTGTGGATGGAGAACAATCAACTCAGGCTGAAGATGATTATAATGCCATGCTTTCAACCACTGATGTTGAACTTCTCAAACGAGCTTGGCGTAACGAGAAAGCAGCCCCGGAGATTCTTCCTTTTCAATCTGATTTGATTGCCCGTGTCAGAGAACAAATTGAGTTGATGGAAGAAACTGTGGACGAAAAATCTACTGTTGGGACTGACCCTCTTTCAGTGTCTTTGTATCAAATGGACTTGGATAGAACCCTCTTTCTTTTGAGGTCGTATCTTCGCATCCGTATCTTGAAGATCGAAAAGTACATGTTCCACATCCGAAAAACTGAAGAACTTTGGAACAGGCTTTCTAAGGATGAGAAATTTTTCACCGAAAGGTGCTCAGATGACCTAAAGAAACATCTGGAGGAGAGTGTTCTATCAAAACTGCCTGAAAATTATCAGTCTTATGAGAGGCAATCTATAATTAGCGAAGAGGATGACATGATTCCAGAACCACGGCTCGACACATTTGTTTTGTGTAGAAGTAAAGATTATCTCACAGGCATTCAGCTTGGAGACGGACCTGTTGATGACAGGTCAAAGCTGTTTGAAATGGAGGCTGGTGTCCTTTACTTTATATGTTACAAATCGATAAAGCCGCTTGTAGAGAGTGGCAAAATTGAACTACTGTGA 687 0.4134 MASRSVDGEQSTQAEDDYNAMLSTTDVELLKRAWRNEKAAPEILPFQSDLIARVREQIELMEETVDEKSTVGTDPLSVSLYQMDLDRTLFLLRSYLRIRILKIEKYMFHIRKTEELWNRLSKDEKFFTERCSDDLKKHLEESVLSKLPENYQSYERQSIISEEDDMIPEPRLDTFVLCRSKDYLTGIQLGDGPVDDRSKLFEMEAGVLYFICYKSIKPLVESGKIELL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3139 228 Pfam GINS complex protein 66 125 IPR021151 -
Psa1g3139 228 PANTHER SLD5 PROTEIN 7 228 IPR008591 GO:0006261
Psa1g3139 228 Coils Coil 51 71 - -
Psa1g3139 228 Coils Coil 224 228 - -
Psa1g3139 228 PIRSF GINS_Sld5 1 228 IPR008591 GO:0006261
Psa1g3139 228 SUPERFAMILY GINS helical bundle-like 23 158 IPR036224 -
Psa1g3139 228 Gene3D - 11 218 - -
Psa1g3139 228 SUPERFAMILY PriA/YqbF domain 172 228 - -
Psa1g3139 228 CDD GINS_A_Sld5 26 144 IPR038749 -
Psa1g3139 228 Pfam DNA replication complex GINS protein SLD5 C-terminus 170 228 IPR031633 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3139 1 166 Core DNA Replication Machinery Family AT5G49010 62.651 1.85e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3139 K10735 - gmx:100784291 333.183