Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3099 ATGCAAACTCATCTCACACTCACTACTATCTTCCTCTACTTCTTCTTAACTCTCTCCACCTCCATCTCAGCCCATGATCAACCCCAACCCCAACCCCAAGATCTAGTCCGTTCATCATGCCTTCACGCTAGATACCCAAATTTATGTCTCCGAACACTCTCCACCTACACCGGCCCCGTCAAAAGCCCATTAGACATAGCCCAGGCTGCACTCCGGGTAAGCTTAGCCCACGCCAAGAGAGTCTCCAAGTATATAGGAGCTTCCAATGTTGGCGCCCAACGCAGCAGCTTGAGTAAGCGTCAGCAGGCTGATCTCAGTGACTGCAAAGAGCAGATAGCCGATTCTGTTGATGAACTCCGGAAGAGCTTGGAGGAGTTGCAGCATATGCGACCGGAGACTTTCCGGTGGCAGATGAGTAATGCTTTGACGTGGGTGAGTGCTGCTCTTACTGATGGTGATACTTGTCTTGATGGGAATGTGATGCCGGATGTGAAGAAAAGGGTTACTGATCTTGCGAGAGTGACGAGTAATGCTCTTTACTTGATTAACCGTGTTGGATGA 561 0.4973 MQTHLTLTTIFLYFFLTLSTSISAHDQPQPQPQDLVRSSCLHARYPNLCLRTLSTYTGPVKSPLDIAQAALRVSLAHAKRVSKYIGASNVGAQRSSLSKRQQADLSDCKEQIADSVDELRKSLEELQHMRPETFRWQMSNALTWVSAALTDGDTCLDGNVMPDVKKRVTDLARVTSNALYLINRVG* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3099 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 184 IPR035513 -
Psa1g3099 186 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 184 IPR006501 GO:0004857
Psa1g3099 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 185 IPR035513 -
Psa1g3099 186 Pfam Plant invertase/pectin methylesterase inhibitor 34 180 IPR006501 GO:0004857
Psa1g3099 186 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 185 - -
Psa1g3099 186 PANTHER PECTINESTERASE INHIBITOR 3 9 185 - -
Psa1g3099 186 Coils Coil 109 129 - -
Psa1g3099 186 CDD PMEI-like_3 38 184 - -
Psa1g3099 186 SMART PMEI_2 31 181 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3099 Psa-Chr1 271429332 271430736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3099 30 185 Carbohydrate Esterase AT3G14310 29.940 2.85e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3099 - - gmx:100816686 234.572