Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3095 ATGACAAAAGTTGCAAAACTAACAAAACTTAAGTCGGTGCTGAAGAAATGGAACACCTTCACCTATTACAATAACAACAACAAGCACAACCGCTCTGACATCAGAGCGGTTGTAAACGAGGATGAGTCATGTATGTTATCGGAACAAAGCCTTCGCCCCGTGTTTGTGGGAAAGACGAGACGTAAATACCTTGTTAACTCCGATGTTGTTGGACATCCGCTGTTTCAGGAGCTTGTGGACAGGTCTCGCAGCTCGGTCGAGGTAAATGGTGACGATGATACGGTTAATGTGGCTTGTGAGGTTGTCTTGTTTGAGCATATGTTGTGGATGATCGAGAATACTGATCCTCAACCGGAATCACTGGATGAACTCGTTGATTATTACAGTTGCTAG 393 0.4427 MTKVAKLTKLKSVLKKWNTFTYYNNNNKHNRSDIRAVVNEDESCMLSEQSLRPVFVGKTRRKYLVNSDVVGHPLFQELVDRSRSSVEVNGDDDTVNVACEVVLFEHMLWMIENTDPQPESLDELVDYYSC* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3095 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 130 IPR003676 GO:0009733
Psa1g3095 130 Pfam Auxin responsive protein 10 111 IPR003676 GO:0009733
Psa1g3095 130 PANTHER SMALL AUXIN-UP RNA-RELATED 4 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3095 Psa-Chr1 270993420 270994442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3095 1 113 Calmodulin-binding Proteins AT3G43120 21.898 4.18e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3095 - - mtr:MTR_2g044020 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3095 1 270993420 270994442 Psa1g3095 1 270993420 270994442 ECH