Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3093 ATGGAGAATGGTGGAGGCTCGAAACTAACCGGCGGCATTGGGCAGATTGTGAGACTAAAGAAAATAATTCATAAATGGCAAAGTGTCACAATTGGCTCAAAAACTTCCCGCCTGCAAATCGAAGAATCTAATACTAGAAAATCACCAATAATCAACAAAAGAATAACAAAATTCATAAATTGTGAGTCTGATGAGGAAAGCTGCAAAAGTCCAGAGCCACCACATGATGTGCCAAAGGGTTACTTGGCGGTCTATGTCGGCCCCGAGCTTCGACGGTTCATCATTCCAACCAGCTACCTTAGCCATTCCCTATTCAAAATGTTGCTTGAAAAGGCTGCTGAGGAATTCGGATTTGATCAGAGCGGCGGGCTCACGATACCGTGTGAGATTGAGACCTTTAAATATCTACTCAAATGCATTGAGGCCCAGGAGAAAGAAGAACAACATGATGACAGCTTGTCTGGAAACTCAGAAACAGAAGGAACCTTGGAAGAGTAA 498 0.4337 MENGGGSKLTGGIGQIVRLKKIIHKWQSVTIGSKTSRLQIEESNTRKSPIINKRITKFINCESDEESCKSPEPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAAEEFGFDQSGGLTIPCEIETFKYLLKCIEAQEKEEQHDDSLSGNSETEGTLEE* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3093 165 MobiDBLite consensus disorder prediction 145 165 - -
Psa1g3093 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 164 IPR003676 GO:0009733
Psa1g3093 165 PANTHER SMALL AUXIN-UP RNA-RELATED 8 164 - -
Psa1g3093 165 Pfam Auxin responsive protein 60 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3093 Psa-Chr1 270911109 270912987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3093 1 152 Calmodulin-binding Proteins AT5G20810 65.806 7.89e-69 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3093 K14488 - gmx:100795275 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3093 1 270911109 270912987 Psa1g3093 1 270911109 270912987 ECH