Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3074 ATGGGGGAAACCTTGAAAAATGATGGAGCAAATCATGTGAAAAATTCCAGAGTTGAAGCCCAGACAAATGTTCAAACAAATGCGGTGATTCCTAACTTAGAACCTTCAAGTCATGATAAAAATAATGATGCAACTGTATATGCCCTACAGACTTGTGATTTGTGCGAGAAAAAATATCATGACTGTTGTACTAAGGATATGAGTGCCCTGCATGCCAACTCCAATATGTCAGGGCATTCCTTTTGTGGAAAAAGTTGCAAAGAGCTTTTTGAGCACTTGAAGAAGTACCTTGGTACCAAGCATGAACTTGATGCAGGCTTTACATGGTGTCTTGTTCGTAGAACAGACGATGATTCGGAGGCAGCTAGTAGGGGAGTTACCCAGTGGGTGGAATGCAACTCCAAGCTGGCTGTTACACTGACTGTGATGGACGAATGCTTTTTACCTGTTGTTAATAGAAGGAGTGGGATCAATTTAATCCATAATAGTTTATACAATAGCGGGTCAAATTTCAGTCGGTTGAATTACACTGGCTTTTATACTGCTATTTTGGAGCCGGGGGATGAAATAATATCTGCAGTTGAGAAACTGGTCATTCCTGCAATTTTTGAACTTGTTCATACATGGACAACAGCTTTTGGCTTCACACATCTCGAGGAATCGCTCAGGCAAGAAATGAGGTTATTGAATATGTTGGTGTTCCCTGGTATTGATATGTTACAGAAGCTTCTAATGGAGCAAGGAAAACTTGATGATGCTGAGCAATTCGAGAATGGCGGCGTGGTTTCTGTTAATCCCACTGTGGTCAATAGGTTAGAAAACTGTGCTTCTCCTTCTAATTCTAGTCATGGCGTACTCAAAAAGAAAAAGAAAATATCGACGTCTTCTCCTATCGATAATATGTCACCCAAATGTCTACTCATTTCACAAAATGGCAAATCTACAAATGGCCTTCCATTGGATCCCTCAGATTGCCATGAACTTCCAGCTTTATGTCAAGCTACTGCGTGTTCTGACCTAGGTACCATAAAAATTGAACTTGTTTCGAACGGGAAACTCCATGCTATTACCGATATGAATTGTGGTTTGTCGGGGCTTGCCCGAAATCCTGTGTTGGATTCTCAAGTGGTGGATAATGATTTGCCTTCTCATAATGGTTTTGAACATGTCCGTGTTGCACTACCCGCTCCATTTCTTGTTGAAGTAGTAGACAGGATGCCCATTTTATATCAATATTACACACACTCCATTTCTTCAAAGGATTGGCGGCTACCATTCAGAAAAGAAAAGGAGATAATTGAAGGCAACGCTTGTCTACATTCACCTGTCGTGCTCGCCGCAACCGGTTAG 1350 0.4133 MGETLKNDGANHVKNSRVEAQTNVQTNAVIPNLEPSSHDKNNDATVYALQTCDLCEKKYHDCCTKDMSALHANSNMSGHSFCGKSCKELFEHLKKYLGTKHELDAGFTWCLVRRTDDDSEAASRGVTQWVECNSKLAVTLTVMDECFLPVVNRRSGINLIHNSLYNSGSNFSRLNYTGFYTAILEPGDEIISAVEKLVIPAIFELVHTWTTAFGFTHLEESLRQEMRLLNMLVFPGIDMLQKLLMEQGKLDDAEQFENGGVVSVNPTVVNRLENCASPSNSSHGVLKKKKKISTSSPIDNMSPKCLLISQNGKSTNGLPLDPSDCHELPALCQATACSDLGTIKIELVSNGKLHAITDMNCGLSGLARNPVLDSQVVDNDLPSHNGFEHVRVALPAPFLVEVVDRMPILYQYYTHSISSKDWRLPFRKEKEIIEGNACLHSPVVLAATG* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3074 449 MobiDBLite consensus disorder prediction 1 24 - -
Psa1g3074 449 MobiDBLite consensus disorder prediction 9 24 - -
Psa1g3074 449 PANTHER PHD FINGER FAMILY PROTEIN 194 300 - -
Psa1g3074 449 PANTHER PHD FINGER FAMILY PROTEIN 37 194 - -
Psa1g3074 449 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 194 300 - -
Psa1g3074 449 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 37 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3074 Psa-Chr1 268680921 268682845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3074 43 247 PHD Transcription Factor Family AT1G05380 49.194 4.96e-70 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3074 - - mtr:MTR_1g103830 397.512