Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3015 ATGAACAAGAACAAGTTTCCTTTTACTCCCTCACAATGGCAAGAGCTTGAACATCAAGCTCTTGTTTACAAGTACATGGCTAGTGGTATCTCTGTTCCTCCTGATCTTCTTTTCACCATCAGAAAAAGCTTTTTGGACTCTCCTCTCTCTTCAAGACTCTTGCCTAACAACCAACAACATCACTTTGGATGGAACTATCTGCAGATGGGTTTAGGAAGAAAGATAGATCCAGAGCCAGGTAGATGCAGAAGAACAGATGGAAAGAAATGGAGATGCTCAAAAGAAGCATATCCAGATTCTAAATACTGTGAGAGACATATGCATAGAGGAAAAAACCGTTCAAGAAAGCCTGTGGAAGTTCTGAAAACAACAACAAATAATGCTTCAACATTTGCAAACTCATCAAACACCAAAAGTAGTTCTTCTTTGTCCTTTGATACACAACAACACCAAAACTACCCTCAAAATTCTATCTATGGTTCCAATTTGCAACATTCCTTTATGTATCCTCACACTGCATCAAGGTCATCAGCATCATCTGGTATTGGTTTGTCATTTGAAGACAATAATGCTTCCTTGTTTCTTGACAGTAACTCTTGCTCTCAGAATAATGGAGATTACAGGAACAGGTATGTGTATGGACAAAAAGAAGAGGTAGATGAGTATGCATTTTTCAAAGAACCTTCCGGTAGCACTACTATGAAAAGCTTCTCTGCTTCATCAATGGAACATGATCCTTGGCAACTAACACCACTCACTATGAGTTCATCATCATCATCATCTTCATCTCTGAGACAGAGGAGTTTTTCTTCTATGTCCAATGATTACTCTTGCTTGCAACTTCAGAGCTTCAATGAACACTCAAAACAGCAAGAACAAGAAGAACCTCAGAAAATTGTTCATCGCTTCTTCGATGAATTGCCGCACAAAGGGAGAGACCAATGGCTTGATTTGGATGATAAATCATCCACTACTCAACTCTCGATTTCTATTCCTTCTTCTGCTCATGATTTTCCAACTTTCACTTCAAGAAATAATCACCATGATGGTTGA 1053 0.3875 MNKNKFPFTPSQWQELEHQALVYKYMASGISVPPDLLFTIRKSFLDSPLSSRLLPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTNNASTFANSSNTKSSSSLSFDTQQHQNYPQNSIYGSNLQHSFMYPHTASRSSASSGIGLSFEDNNASLFLDSNSCSQNNGDYRNRYVYGQKEEVDEYAFFKEPSGSTTMKSFSASSMEHDPWQLTPLTMSSSSSSSSSLRQRSFSSMSNDYSCLQLQSFNEHSKQQEQEEPQKIVHRFFDELPHKGRDQWLDLDDKSSTTQLSISIPSSAHDFPTFTSRNNHHDG* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3015 350 Pfam QLQ 7 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa1g3015 350 PANTHER - 2 336 IPR031137 GO:0005634|GO:0006351|GO:0032502
Psa1g3015 350 SMART QLQ_2 6 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa1g3015 350 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Psa1g3015 350 MobiDBLite consensus disorder prediction 125 149 - -
Psa1g3015 350 Pfam WRC 77 119 IPR014977 -
Psa1g3015 350 PANTHER GROWTH-REGULATING FACTOR 6 2 336 - -
Psa1g3015 350 ProSiteProfiles QLQ domain profile. 7 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3015 Psa-Chr1 264244805 264248149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3015 7 119 GRF Transcription Factor Family AT3G13960 70.796 1.65e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Psa1g3015 WRC 7.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3015 - - gmx:100781613 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3015 1 264244805 264248149 Psa1g3015 1 264244805 264248149 ECH