Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2977 ATGGAAGCTGATCGAATCCAACAATTGCAGAATGAAGGACTAATTAGTTGCTTTTGGAACCGTGTGGATAATCCTGGTGCCATATGGAACTCAGAAAATGTCTTGATCTTTTACCTTCCAAGCCTAGTCCTACAAATATTACTCGTTGTTTTCGCAACTCGTTTAATGTTTTGGATCCTTAGACCCTTACATCAACCTCATTTTGTTGCTGAGCTTCTTGCCGGTTTCATGCTAAATATATATGTTCCAATACTGAATTCCACACTCTTTGGAATAGCACTTCAAATAAAAGGACTTCTTGGTTTTGCGTCTATAGCACAATTTGGTGTAATCTACTATGTGTTTGTAACTGGTTTAGAGATGAACTTAGACACAGTATCAAGAGCAAAACAAAAAGCATCAACTATTGCTATAGCTGGAACACTATTTCCAATGATAGTAGGGTTTGTGACATATATTATAGTTGGAAAAACATTCGTAAAAAACGGCGAATTCAATACAGTTTCAGCTTATTTCTTATGGTCGTTAACAATTAGTATGACAAGTTTTCCCGTGGTGGCAGACATTCTTTCAGCTCTTAAGATTCTCTATACAGGACTTGGTAGGGTTGCATTAACAGCTGCTACAATCAATGACTTTATCAATTGGGCAATGTTTATATTTCTTATACCGTTAATTGTTAACGGTAAAAGAGGAATATTATCGGTGTTATCGACTATATTTTTCGTTCTTTTTTGTCATTATGTATTACGTCCTCCACTCAACAAAATTTTAATACGAAAAACGAATCAAAATGATTGGGACTTGTATGAGTTATCCTATGTGATAGTTGGTGTTGTTGCATGTGCAACTGTTACTGAATTTCTTGGTACACATTCTGTTGTTGGAGCATTGGTTTTCGGGTTGACTCTTCCGCGTGGAAAGTTTGCAGAAATGTTGATAGAACAATTGGATGGTATTGGATCGGGATATTTAGCACCGTTGTTTTTTGCGAGTATTGGTTTGAGAACTGATGTGCTTGCAGCTTTAAAGGGAAACTTTATTTTGGTTATTTTTATCATGATAATGATGATTTCAGCTAAGATCTTGAGTACTATAGTTGCTACTCATTTCTACGGAATGCCGATTCGTGATAGTATCGCTCTTGGAATGCTTATGAATACGAAAGGGGTCTTATCTTTGATAATAGTCAACATTGGATGGGAAAGAAAGGTTATTAGCAAAGAGGCGTTTACAGTTATGGTTTTAAGCATATTTTTTATGACAGTTATAGTGGCACCTATTATCAATGCAATGTACAAACCAAGATTGACATATGAGCAAAACAAGTTAAGGACAATAGAGAATTTGAAAAGTGATTCTGAGATTAGAGTTATGGTTTGTGTACACAATGCTCGCCAAGCGAACGGAATGATCAATATTCTTGAAGCTTGTAATGGCGTAAATGTTTCTCATTTACGCGTCTTTGCACTTCAACTTGTTGAACTCAAAGGACGTTCGGCTGCACTAATGGTTGCGCAATTAGACCAACAACAACAACAAAAAGAATCACAAATCCTCGACCAATCGTTGGAGACGGATAGCTACTCGTCCAACCATATCACGAATGTTTTTGAAGAATATTCGTCTAATAATGCAAACACTCTTGTGGAAAATCTTGTTGCTATGTCTTCTTATTCGACGATTCATAGAGACATATATAATTTAGCGTTGGAGAAAGAGGCGTCGTTGGTTTTACTCCCTTTTCATAAACAAAGCACTGTTGAAGGTTCTTTAGAGGTAGCTGAAGGTGCGGTTAAAGACATAAACCGAAACTTGATGCAAGACGTGCCTTGTTCGGTTGGAATCTTTGTTGATCGTGGACATCACGCAGCGCTGTCCAAGATCAAAATGCATGTTATTATGATTTTCATAGGTGGACCTGACGACAGAGAAGCCTTAGCTATTGCTTGGAGAATGTCGAAGCATCCGTGGACACGGCTTACCATGGTGAGGATATTTTTACGTGGTAAGGCAGCCGAAGTTGATTCGTCGGGGCATAATGAAGCACAAGGACTATTATCAGCGGTTTTAGATTCCGGAAAGCAAAAAGAGTTGGATGAAGAATACGTAGGTTCGTTTCGACTTAAAGCTGTTAACAATGAAGATACTATAACTTATGCCGAAAGAGAAGTGCATGCAGGTGAAGATATCCTTAAAGTGCTTAATGAATTGGACAAACTAGGTTGTGATCTATACATTTTAGGACATGGAAAAGGAAGAAACTCTATGGTTTTGTCGAATTTGTTTGAATGGGCTGATTGTCCTGAGCTTGGTGTTATTGGTGACATGTTGGCATCAGATAGTTTTGGTTCAAATTCTTCAATACTTGTTGTACAACAATATGGATTTGGAGGTGTAGAATTCAGTACTAGTCATTCATCCAACGAGGATCTTGAGTCACTTTCCCAAAGGTAG 2457 0.3765 MEADRIQQLQNEGLISCFWNRVDNPGAIWNSENVLIFYLPSLVLQILLVVFATRLMFWILRPLHQPHFVAELLAGFMLNIYVPILNSTLFGIALQIKGLLGFASIAQFGVIYYVFVTGLEMNLDTVSRAKQKASTIAIAGTLFPMIVGFVTYIIVGKTFVKNGEFNTVSAYFLWSLTISMTSFPVVADILSALKILYTGLGRVALTAATINDFINWAMFIFLIPLIVNGKRGILSVLSTIFFVLFCHYVLRPPLNKILIRKTNQNDWDLYELSYVIVGVVACATVTEFLGTHSVVGALVFGLTLPRGKFAEMLIEQLDGIGSGYLAPLFFASIGLRTDVLAALKGNFILVIFIMIMMISAKILSTIVATHFYGMPIRDSIALGMLMNTKGVLSLIIVNIGWERKVISKEAFTVMVLSIFFMTVIVAPIINAMYKPRLTYEQNKLRTIENLKSDSEIRVMVCVHNARQANGMINILEACNGVNVSHLRVFALQLVELKGRSAALMVAQLDQQQQQKESQILDQSLETDSYSSNHITNVFEEYSSNNANTLVENLVAMSSYSTIHRDIYNLALEKEASLVLLPFHKQSTVEGSLEVAEGAVKDINRNLMQDVPCSVGIFVDRGHHAALSKIKMHVIMIFIGGPDDREALAIAWRMSKHPWTRLTMVRIFLRGKAAEVDSSGHNEAQGLLSAVLDSGKQKELDEEYVGSFRLKAVNNEDTITYAEREVHAGEDILKVLNELDKLGCDLYILGHGKGRNSMVLSNLFEWADCPELGVIGDMLASDSFGSNSSILVVQQYGFGGVEFSTSHSSNEDLESLSQR* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2977 818 Pfam Sodium/hydrogen exchanger family 47 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa1g2977 818 Gene3D - 40 441 IPR038770 -
Psa1g2977 818 PANTHER CATION/H + ANTIPORTER 14 807 - -
Psa1g2977 818 PANTHER CATION/H+ EXCHANGER 3 14 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2977 Psa-Chr1 261973258 261976462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2977 7 795 Antiporter Super Family AT2G13620 35.920 5.41e-172 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2977 - - mtr:MTR_2g040100 1153.66