Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2974 ATGGAGGATCTCATGGTGAAGGAGGAAATAGTTGAGGCCATAAATGGAGGAGAAGAGGAACAAGACCAACAGCATGAGGAGGTGGGTACCATTGCTGGTGGTGAAGAGGATGAGGCTGTTTCCACCTTGACTATGGAAAGGGTTGCTGCAGCTAAGAAATTCATTGAGAATCATTATAGGTCTCAGATGAAACACATCCAAGAACGCAAGGAAAGGCGTTCGGAGCTGCAAAAGGAGTTAGAGTCGTCTCATGTACCAGAAGAGGAACAAATCAATTTAATTAAGGATTTAGAGAGCAAGGAGACTGAGTTTATGCGGTTGAAAAGACATAAAATATGTGTTGAAGATTTTGATCTTTTAACCATTATTGGTAGGGGAGCCTTTGGTGAGGTAAGACTCTGTCGCGAGAAGAAATCGGGTAATATATATGCGATGAAAAAGTTGAAAAAGTCCGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTTCTTGCGGAAGTTGTGAATGACTTCATTGTGAAACTTTATTACTCATTTCAAGATCCTGAATTCTTATATCTTATAATGGAATATTTACCTGGTGGCGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACAGAAAGTGTGGCTAGGTTTTACATCGCCCAAACCGTTTTAGCCATAGAGTCTATTCATAAACACAACTACATTCATCGGGATATAAAACCTGACAACCTTCTGTTAGACAAATGTGGTCACATGAAACTGTCGGATTTCGGTCTTTGCAAACCACTTGACTGCTCAAATCTATCATCTATAAGTGAAAGTGAAATATTGGATGATGATAACTTGAATGATACAATGGACGTTGATGGAAATTGCCCAAATAACAGAAATGGTAGGCGTTGGAAAAGCCCGCTCGAGCAACTTCAGCATTGGCAAATGAATAGGAGGAAGTTGGCATTTTCTACTGTTGGAACTCCAGACTATATTGCTCCCGAAGTGTTATTGAAAAAGGGTTATGGTGTGGAGTGCGACTGGTGGTCTCTTGGGGCTATTATGTATGAGATGCTTGTCGGTTATCCTCCATTTTACTCTGATGATCCTGTAACAACATGCCGAAAGATTGTGCACTGGAAAAATCACTTAAAGTTTCCGGACGAGGCAAGACTGACCCCCGAAGCAAAAGATCTGATATGCAAGTTGCTTTGTGGTGTTCCGCATAGGCTTGGTACCAGAGGAGCAGCTGAAATTAAAGATCATCCTTGGTTCAGAGATATCTTATGGGACAGGCTCTATGGAACTGAGGCAGCATTTAAACCGCGGGTCTTTGGGGAGCTTGACACTCAGAATTTTATGAAATTCGATGAGGTTGAACTGCCAAAGCCAACTCGAACAGGATCCGGACCCATCAGAAAGACGCTCTTAACTACTCAAGATCTCAGTTTCGTTGGCTATACATATAAGAATTTTGCCGCTGTCAAGGGGAAGCGTCATTCTATTGAAAAGGAAAGCCTGTCGCCGCGGTCATCAATCGACTCCACACACAGTGATTCTGCAGTAAACTATTCCAACTGA 1578 0.4214 MEDLMVKEEIVEAINGGEEEQDQQHEEVGTIAGGEEDEAVSTLTMERVAAAKKFIENHYRSQMKHIQERKERRSELQKELESSHVPEEEQINLIKDLESKETEFMRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVVNDFIVKLYYSFQDPEFLYLIMEYLPGGDIMTLLMREETLTESVARFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDKCGHMKLSDFGLCKPLDCSNLSSISESEILDDDNLNDTMDVDGNCPNNRNGRRWKSPLEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEARLTPEAKDLICKLLCGVPHRLGTRGAAEIKDHPWFRDILWDRLYGTEAAFKPRVFGELDTQNFMKFDEVELPKPTRTGSGPIRKTLLTTQDLSFVGYTYKNFAAVKGKRHSIEKESLSPRSSIDSTHSDSAVNYSN* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2974 525 MobiDBLite consensus disorder prediction 14 32 - -
Psa1g2974 525 SUPERFAMILY Protein kinase-like (PK-like) 100 471 IPR011009 -
Psa1g2974 525 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 524 - -
Psa1g2974 525 ProSiteProfiles AGC-kinase C-terminal domain profile. 425 498 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa1g2974 525 MobiDBLite consensus disorder prediction 507 525 - -
Psa1g2974 525 ProSiteProfiles Protein kinase domain profile. 117 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2974 525 MobiDBLite consensus disorder prediction 65 84 - -
Psa1g2974 525 MobiDBLite consensus disorder prediction 503 525 - -
Psa1g2974 525 SMART serkin_6 117 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2974 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Psa1g2974 525 Gene3D Transferase(Phosphotransferase) domain 1 203 441 - -
Psa1g2974 525 MobiDBLite consensus disorder prediction 14 36 - -
Psa1g2974 525 SMART pkinase_C_6 425 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa1g2974 525 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 23 524 - -
Psa1g2974 525 CDD STKc_NDR_like 115 489 - -
Psa1g2974 525 Pfam Protein kinase domain 316 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2974 525 Pfam Protein kinase domain 119 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2974 525 Gene3D Phosphorylase Kinase; domain 1 108 202 - -
Psa1g2974 525 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2974 Psa-Chr1 261933086 261937194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2974 21 501 AGC Kinase Gene Family AT4G33080 75.519 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Psa1g2974 Pkinase 6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2974 K08790 - gmx:100811359 852.432