Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2921 ATGGAAGCAAAAGGTGGCGGAGAATTTAGAAGGCTTCACATAATCTATTTTCTTAGTCATATGGGTGGTCATGCAGAACATCCTCATCTCATTCGTGTTCTTCATCTCGCTCGAAATGGTGTTTTTCTCCGAGATATTAAGAGATGGCTAGGTGAATTGAGAGGAAAAGACTTGCCTGAATCATTTGCTTGGTCCTACAAAAGGAGGTACAAGAGTGGATATGTGTGGCAGGATTTAATGGATGACGACCTCATAACCCCCATTTCAGATAATGAATACGTCCTCAAAGGATCACAAATCCACACTACCCCTTTTGAAACTGAATCAATAAATGAAAAGAAGAATGGTTCTGATATAGCTGTACAGGTTGAAGAGGACAACAAACAAAAGCAGCAAAAGAAACCATCTTTATCTGAAGAAGAATCTGAAATTCGGCAAGAAACTGATACGAGAAAGAATAATCTAAATCATGTGTCATCAGAAATAAGTCAGGATTCATTGGTTTTCAGCTCGGACAGATCGTCGGTGACCGATGATGATTCGTCTTCTAAAGTCGAAGAAGAGAAGCTTTTAAGTAATAGTAAAGATAGTTGTTTGGGTGAAAAGAATCATGAGAAATTTGAGAGTTTCACATTTCCTTCTTTGTATCATAATTTGATGAGTAAGAAGGGTAAAAAAGATGGACATGATAACAAAACTGAAACTACTACTACACCTCCTGATTCAACATTGTCGACTCCAACTTCGTCAACATCGTCTCAATCCTCTTTTACTAAGATCAGAAGCAATTCTACTAGAGTTTCTAGTGTGTTCAGAAATTTGATTGGTTGTGGAGCTGTGGCAACAAATGATGCTGCTTTTGTCTCTTTGAACACTGCTCCAAAACTTGTCCCTAAAGAAACTAAGTATGTGCTTGGAAAAAGGGGTGAGATTTGTAGAGGAGACAAATTGGGAGGATCGGCTAGGTGTTTTAGTACTCCTTGGAATTGCCATGATCAAAATGGACATTATGAACCTAGAAAAAGCTGTGATGGAGGCGAAATAAGCAAAAGCAGGAAAAAGCTAAGCGAGTTAATGAGTCAAACTTCTCATAAACCATTTGGGGGACCAGTTTGCTCGCAATGTGGGAAATCATTTAAGCCTGAGAAAATGCACAAACACATGAAGTCTTGTAAAGGAATGAAAGGCATGGGAACTTCAAATATTGCTGAGGAAACACAACATCAGAGATCAACTTCCTCTTGTAAAGATTACCTTTTGCAAAATTAA 1269 0.383 MEAKGGGEFRRLHIIYFLSHMGGHAEHPHLIRVLHLARNGVFLRDIKRWLGELRGKDLPESFAWSYKRRYKSGYVWQDLMDDDLITPISDNEYVLKGSQIHTTPFETESINEKKNGSDIAVQVEEDNKQKQQKKPSLSEEESEIRQETDTRKNNLNHVSSEISQDSLVFSSDRSSVTDDDSSSKVEEEKLLSNSKDSCLGEKNHEKFESFTFPSLYHNLMSKKGKKDGHDNKTETTTTPPDSTLSTPTSSTSSQSSFTKIRSNSTRVSSVFRNLIGCGAVATNDAAFVSLNTAPKLVPKETKYVLGKRGEICRGDKLGGSARCFSTPWNCHDQNGHYEPRKSCDGGEISKSRKKLSELMSQTSHKPFGGPVCSQCGKSFKPEKMHKHMKSCKGMKGMGTSNIAEETQHQRSTSSCKDYLLQN* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2921 422 MobiDBLite consensus disorder prediction 177 197 - -
Psa1g2921 422 PIRSF UCP031043 321 419 IPR021182 -
Psa1g2921 422 PIRSF UCP031043 1 308 IPR021182 -
Psa1g2921 422 Pfam Protein SOSEKI, plant 13 302 IPR010369 -
Psa1g2921 422 PANTHER F3F20.2 PROTEIN 3 413 - -
Psa1g2921 422 Coils Coil 120 140 - -
Psa1g2921 422 MobiDBLite consensus disorder prediction 235 259 - -
Psa1g2921 422 MobiDBLite consensus disorder prediction 222 259 - -
Psa1g2921 422 MobiDBLite consensus disorder prediction 401 422 - -
Psa1g2921 422 MobiDBLite consensus disorder prediction 155 176 - -
Psa1g2921 422 MobiDBLite consensus disorder prediction 123 197 - -
Psa1g2921 422 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 3 413 IPR010369 -
Psa1g2921 422 MobiDBLite consensus disorder prediction 123 154 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa1g2921 DUF966 2.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2921 - - aprc:113855595 479.559