Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2903 ATGGAACTTGATAATGGTAAACAGCATCAAAGCGGAAAATTTCGAGCGCTGAAGTTGGTAGCATTTGTTGCTCTATGCTTCATTCTAATCTCTCCTGCTGAGGCGTTTGATCCATTGGATCCAACCGGGAATGTGACAATAAGATGGGATATAATGTCTTGGACATCAGATGGTTATATGGCAACCGTGACATTATTTAACTTTCAACTATACCGAAACATTATGAACCCGGGATGGACATTAGGATGGACATGGGCGAAGAAAGAAATCATATGGGCTATGATGGGAGCACAAGCTACAGAACAAGGAGACTGTGCAAAGTTCAAGATAAAGATTCCTCATAGTTGCAAAAGAAGTCCTCAAGTTGTTGATTTATTGCCCGGTGCTTCTTTCAATATGCAATACACAAACTGTTGCAAAGGTGGTGTGTTAACATCTTGGGGGCAGGACCCTTCTGGTGCAGTCGCAGCATTTCAGATGGGTGTAGGACTCTCGGGAAGGTCTAATAAGACGGTTAAACTACCTACGGATTTTAAATTGCGTGGACCGGGGCCGGGATATTCGTGTGGTCCTGCTAAGAGAGTTCCTTCAACTGTTATTCTTACCGATGATCGTAGAAGAAAAGCTCAGGCTTTGATGTCCTGGAATGTGACATGCACTTATTCACAATTTCTTGCCTACAAGAACCCAAGTTGTTGTGTTTCTTTATCAACTTTCTACAATGACCAAGTCACAGCTTGCCCTACCTGTGCTTGTGGTTGTCAGAACAACGCTACTTGCGTCACGAAAGAATCGAAGATCCTGAAAGAAGTTGATGGGAATAATAAGACTAGGAAGAGTGATATCACACCAAAACCATTGTTACAATGCACGCGACACCTTTGTCCTATTCGTGTTCATTGGCATATAAAAGACAACTATAAGGACTATTGGCGTGTGAAGATTGCAATCATCAACTTCAACTATCGATTGAACTATACACAATGGGGTCTTGTTGTGCAACACCCTAATCTCAACAATGTTACACAAGTTTATAGCTTTGAATACATGCCACTTCTTCCTTATCAAGCCATAAATGATACAGGAATGTTCTATGGTTTGAAATACTATAATGATCTATTAATGGAAGCTGGTGCTAAAGGAAATGTACAATCTGAGGTACTTATGAAAAAGGACAAGAACACATTTACATTACAACAAGGATGGGCATTTCCTAGAAGAGTATACTTCAATGGTGATGAATGTATGCTGCCACCACCAGATTCATACCCTTTCCTGCCAAATTCTGCTAATAGGCTACCAGTTATATCCATAACAGTCTATGTCATTTTTGCATCATTTTTCATGTAG 1350 0.4052 MELDNGKQHQSGKFRALKLVAFVALCFILISPAEAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGDCAKFKIKIPHSCKRSPQVVDLLPGASFNMQYTNCCKGGVLTSWGQDPSGAVAAFQMGVGLSGRSNKTVKLPTDFKLRGPGPGYSCGPAKRVPSTVILTDDRRRKAQALMSWNVTCTYSQFLAYKNPSCCVSLSTFYNDQVTACPTCACGCQNNATCVTKESKILKEVDGNNKTRKSDITPKPLLQCTRHLCPIRVHWHIKDNYKDYWRVKIAIINFNYRLNYTQWGLVVQHPNLNNVTQVYSFEYMPLLPYQAINDTGMFYGLKYYNDLLMEAGAKGNVQSEVLMKKDKNTFTLQQGWAFPRRVYFNGDECMLPPPDSYPFLPNSANRLPVISITVYVIFASFFM* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2903 449 PANTHER PROTEIN COBRA 1 445 IPR006918 GO:0010215|GO:0031225
Psa1g2903 449 PIRSF COBRA 9 449 IPR006918 GO:0010215|GO:0031225
Psa1g2903 449 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Psa1g2903 449 PANTHER COBRA-LIKE PROTEIN 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2903 Psa-Chr1 256320898 256323091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2903 11 438 COBRA Gene Family AT3G02210 58.237 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2903 - - gmx:100813134 809.29