Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2902 ATGATTATAGTAAACTTCATCACAAAACCAACACTCTCTCTTTTCCATTCTGGTGCAGATCTTGAACTTCAACTTGAGCTTTCTTGTCTCTTTCAATCACAAAATCTGCACCAAGAAATGGACTCAACCATTGGATCTCGTGCTGGTTTTGTAGCTTTTCTGTTTTTACTATTCTCTTGCTCGACATTCACTTCCACAGAAGCTTATGATCCGTTAGATCCAAATGGGAATATCACACTCAAATGGGATATTATTAGTTGGACTGCAGATGGTTATGTTGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCATATTCAAGAGCCGGGATGGACATTAGGGTGGACATGGGCTAAAAAGGAAGTAATCTGGAACATGATGGGAAGCCAAACAACAGAACAAGGAGATTGTTCAAAATTCAAAGCAGGAATCCCACATTGTTGTAAGAAGGATCCGACAGTTGTTGATCTGTTACCAGGAACACCTTACAACCAACAGATTGCAAATTGTTGCAAAGGCGGTGTCTTGAATTCATGGGCTCAGGATCCAAGCAACGCAGTAAGTTCTTTTCAGGTTAGTGTCGGTTCTGCTGGAACAACTAATAAAACAGTTAAGCTTCCGAGAAATTTCACCCTCAGAGCACCAGGTCCTGGTTACACTTGTGGTCCGGCAAAAATCGTCAAACCAACTCAATTTATTACTAGTGACAAGAGGAGAGTCACACAAGCCTTGATGACATGGAATGTTACCTGCACGTATTCTCAATTCTTGGCTCAAAAGACACCAACTTGTTGCGTTTCACTCTCATCCTTCTACAATGATACAATAGTAGACTGCCCAACCTGCACTTGTGGCTGTCAAAACAAAACACAACCGGACAGTTGTGTAAATCGAAACTCTCCACATTTATCTTCAGTTGTATCATCATCAGGAAAACCGTTAAATACACCTCTAGTCCAATGTACAAGTCACATGTGTCCGATTCGAGTGCATTGGCATGTGAAGCTAAATTATAAAGAGTACTGGAGGATCAAGATCACAATCACGAATTTCAATTACAGAATGAACTACTCTCAATGGAATCTCGTGGTGCAGCATCCCAATTTCGATAATCTTACTCAGCTTTTCAGCTTTAAGTACAAGTCGCTAAATCCCTATGAGGGCTTAAATGATACAGGTATGCTTTGGGGAGTGAAATTCTACAACGATTTTCTTTCATCAGCTGGATCATTAGGTAATGTGCAATCAGAAATCTTATTCAGAAAGGACAAATCAACATTCACATTCGATAAGGGATGGGCCTTTCCTCGAAGAATTTATTTCAACGGTGATAATTGTGTTATGCCTCCTCCAGATGCTTATCCTTGGTCACCAAATGCATCTTCAAAACTAGTTTTCTCTTTACTTACTACACTCATAGCCACTTTAGCTTCTTTGTTAATCTTATTGAGTTGA 1458 0.3978 MIIVNFITKPTLSLFHSGADLELQLELSCLFQSQNLHQEMDSTIGSRAGFVAFLFLLFSCSTFTSTEAYDPLDPNGNITLKWDIISWTADGYVAVVTMYNFQQYRHIQEPGWTLGWTWAKKEVIWNMMGSQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPSNAVSSFQVSVGSAGTTNKTVKLPRNFTLRAPGPGYTCGPAKIVKPTQFITSDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVDCPTCTCGCQNKTQPDSCVNRNSPHLSSVVSSSGKPLNTPLVQCTSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFKYKSLNPYEGLNDTGMLWGVKFYNDFLSSAGSLGNVQSEILFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWSPNASSKLVFSLLTTLIATLASLLILLS* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2902 485 PANTHER PROTEIN COBRA 44 484 IPR006918 GO:0010215|GO:0031225
Psa1g2902 485 PIRSF COBRA 42 485 IPR006918 GO:0010215|GO:0031225
Psa1g2902 485 Pfam COBRA-like protein 92 255 IPR006918 GO:0010215|GO:0031225
Psa1g2902 485 PANTHER COBRA-LIKE PROTEIN 44 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2902 Psa-Chr1 256317815 256320409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2902 54 484 COBRA Gene Family AT3G02210 74.074 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2902 - - gmx:100815779 812.757