Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2901 ATGGACTCAACGATTGGATCTCGTGTTGGCTTTGTAGCTTTACTGGTTTTACTATTCTCTTGCTCAACATTCACTTCCACAGAAGCTTATGATCGGTTAGATCCAAATGGAAATATAACACTCAAATGGGATATCATGAGTTGGACTGCAGATGGTTATGTTGCTATTGTAACAATGTACAACTTTCAACAATATCGTCATATTCAAAAGCCAGGATGGACATTAGGGTGGACATGGGCTAAAAAGGAAATAATTTGGAACATGATTGGAAGCCAAACAACATACCAAGGAGATTGTTCGAAATTCAAAGCAGAAATTCCACATTGTTGTAAGAAAGACCCAACCGTAGTTGATTTGTTACCGGGAACACCTTACAACCAACAGGTTGGAAATTGTTGCAAAGGTGGTGTCTTGAGTTCATGGGCTCAGGATCCGAGCAATGCCGTAAGTTCTTTTCAGGTTATTGTTGGCTCAGCTGGAACAACTAATAAAACGGTTACACTTCCAAGAAATTTCACCCTCAGAGCACCTGGTCCTGGTTATACTTGTGGTCCTGCAAAAATTGTCAAACCAACTCAATTTATTACCAGTGACAAGAGAAGAGTCACACAAGCCTTGATGACATGGAATATTATCTGCACTTATTCTCAAAGACTTCAAAAAAGACTTAGAGTATGA 678 0.3938 MDSTIGSRVGFVALLVLLFSCSTFTSTEAYDRLDPNGNITLKWDIMSWTADGYVAIVTMYNFQQYRHIQKPGWTLGWTWAKKEIIWNMIGSQTTYQGDCSKFKAEIPHCCKKDPTVVDLLPGTPYNQQVGNCCKGGVLSSWAQDPSNAVSSFQVIVGSAGTTNKTVTLPRNFTLRAPGPGYTCGPAKIVKPTQFITSDKRRVTQALMTWNIICTYSQRLQKRLRV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2901 225 PANTHER COBRA-LIKE PROTEIN 8 222 - -
Psa1g2901 225 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Psa1g2901 225 PANTHER PROTEIN COBRA 8 222 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2901 Psa-Chr1 256167319 256170086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2901 15 222 COBRA Gene Family AT3G02210 74.038 9.12e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2901 - - lja:Lj1g3v0569370.1 398.282