Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g2882 | ATGGAACTTGAATACCAGTGGGTGATGGGAAAGTTATGGTGGACAGTAGGGTTGATAGTGATAAGCAGTGTTATAATATTGGTGGAGAAAGTGTTGTTGAAGCCAAGAAGGATTAGATCAGTGATTGAAAAACAAGGTATCAATGGACCAAAGCCTTCTTTTCCCTATGGCAACATTTCTGAGATGCAGCAGATTCGTCCCCAACCTTCTGCATCTGCTGATCCGTATCAGGAATGGATTCATTCCCTGTTCCCATATTTTCAAACCTGGAAACAACGTTACGGTTCAGTTTATCTATACTCTACCGGACTGAAACAACATCTATATGTGGGGAAGCCAGAATTGATAAAAGATATAAACTTACACACGTCCTTAGATCTAGGTAGGCCTTCCTATCTAAGCAAACCATTAATGCCTATGCTTGGAAATGGCATCCTCAGAGCCAATGGACAACTATGGTCTTTCCAGAGAAATCTTATTGTTCCTGAGTTCTTCATGTCCAAAATTAAGAACATGATAGACATTATGGAGGAATCTACCTTAACAATTATCAAAAAATGGGAGACATGTATAACCGAAAACAAAGAAAAGATTGCAGAGATAGTGATTGAAGTTGATTTGAAGATTCTTACAGAAGACATTATTTCAAAAGCTTGTTTTGGAAGCGATTACACACAAGGAAAGCAAATATTTTCAAAGTTGAAAGATATGCAAGCTGCACTTTCAAAGCCTAGTATACTTTTTGGATTTCTAAACCTAAGTTTTTTTCCCACTAAGGAAAGCAAAGAGATGTGGAGGTTGAAGAAGGAGGTGGACGAGTTGGTAATGAACATCGTATGTAATCGTGAAATACAAAACAGAGAGAACAATTTAAACGAGAAACGGAGCGATCTATTACAAAAAATACTAGAAGGTGCTGCAAATGACACAAGTTTAAAAGACGTCGTGCAGAACAAGAATCGAACGATTATAGATCTCTGCAAAAATATATACTTTGCTGGCTCTGAGTCAACTGCTCTCGCAATTACTTGGACATTGCTGATGCTTGCATTACATCCAGAATGGCAACAACGCGTCCGATCTGAAATTTTGGATACTTTCGATAACAGTTCGCCTCGTTTTTTTCGTGACTCTACCAAACTTCAAAAATTGAAAGTGCTAACAACTGTGATTCAAGAGAGTTTACGTCTCTACGGACCTGGAGTATTTGCGACAAGGGAAGTTTTAGCTGATATGAAGTTGGGAGAGTTCGTGCTCCCTAAAGGCATATTTACGTGGTTGTTCATTCCGTCGCTGCATCGCGACATTGATAATTGGGGTACAGATGCTACAAAATTCAAGCCGGAAAGATTTGATAATGGTGTTTCTGCAGCTTGTAAGTATCCTCAGGCATATATACCATTTGGACTTGGGAGTCGAAGTTGTCTCGGTCAAAACTTTGCGATTACGCAGATGAAGATAATACTGAGTCTTCTTATTTATAATTTCTCCTTTGAGGTTTCACCAAATTATAGGCATTTTCCTGTCTATAATATGTTGTTGATGCCAAAATATGGTCTGAAGCTTCTTGTTACCAAGGTTGATAGTTCGGGAAAATGA | 1599 | 0.3859 | MELEYQWVMGKLWWTVGLIVISSVIILVEKVLLKPRRIRSVIEKQGINGPKPSFPYGNISEMQQIRPQPSASADPYQEWIHSLFPYFQTWKQRYGSVYLYSTGLKQHLYVGKPELIKDINLHTSLDLGRPSYLSKPLMPMLGNGILRANGQLWSFQRNLIVPEFFMSKIKNMIDIMEESTLTIIKKWETCITENKEKIAEIVIEVDLKILTEDIISKACFGSDYTQGKQIFSKLKDMQAALSKPSILFGFLNLSFFPTKESKEMWRLKKEVDELVMNIVCNREIQNRENNLNEKRSDLLQKILEGAANDTSLKDVVQNKNRTIIDLCKNIYFAGSESTALAITWTLLMLALHPEWQQRVRSEILDTFDNSSPRFFRDSTKLQKLKVLTTVIQESLRLYGPGVFATREVLADMKLGEFVLPKGIFTWLFIPSLHRDIDNWGTDATKFKPERFDNGVSAACKYPQAYIPFGLGSRSCLGQNFAITQMKIILSLLIYNFSFEVSPNYRHFPVYNMLLMPKYGLKLLVTKVDSSGK* | 533 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g2882 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 468 | 477 | IPR017972 | GO:0005506|GO:0016705 | |
Psa1g2882 | 532 | Pfam | Cytochrome P450 | 83 | 523 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PRINTS | E-class P450 group I signature | 322 | 339 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PRINTS | E-class P450 group I signature | 342 | 368 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PRINTS | E-class P450 group I signature | 465 | 475 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PRINTS | E-class P450 group I signature | 475 | 498 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 11 | 522 | - | - | |
Psa1g2882 | 532 | SUPERFAMILY | Cytochrome P450 | 79 | 525 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | Coils | Coil | 281 | 301 | - | - | |
Psa1g2882 | 532 | Gene3D | Cytochrome P450 | 34 | 529 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 11 | 522 | - | - | |
Psa1g2882 | 532 | PRINTS | P450 superfamily signature | 333 | 350 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PRINTS | P450 superfamily signature | 389 | 400 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PRINTS | P450 superfamily signature | 466 | 475 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Psa1g2882 | 532 | PRINTS | P450 superfamily signature | 475 | 486 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g2882 | Psa-Chr1 | 254057536 | 254061111 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g2882 | 115 | 524 | Cytochrome P450 | AT5G24900 | 42.067 | 6.13e-122 | 362 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g2882 | - | - | gmx:100801472 | 655.595 |