Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2882 ATGGAACTTGAATACCAGTGGGTGATGGGAAAGTTATGGTGGACAGTAGGGTTGATAGTGATAAGCAGTGTTATAATATTGGTGGAGAAAGTGTTGTTGAAGCCAAGAAGGATTAGATCAGTGATTGAAAAACAAGGTATCAATGGACCAAAGCCTTCTTTTCCCTATGGCAACATTTCTGAGATGCAGCAGATTCGTCCCCAACCTTCTGCATCTGCTGATCCGTATCAGGAATGGATTCATTCCCTGTTCCCATATTTTCAAACCTGGAAACAACGTTACGGTTCAGTTTATCTATACTCTACCGGACTGAAACAACATCTATATGTGGGGAAGCCAGAATTGATAAAAGATATAAACTTACACACGTCCTTAGATCTAGGTAGGCCTTCCTATCTAAGCAAACCATTAATGCCTATGCTTGGAAATGGCATCCTCAGAGCCAATGGACAACTATGGTCTTTCCAGAGAAATCTTATTGTTCCTGAGTTCTTCATGTCCAAAATTAAGAACATGATAGACATTATGGAGGAATCTACCTTAACAATTATCAAAAAATGGGAGACATGTATAACCGAAAACAAAGAAAAGATTGCAGAGATAGTGATTGAAGTTGATTTGAAGATTCTTACAGAAGACATTATTTCAAAAGCTTGTTTTGGAAGCGATTACACACAAGGAAAGCAAATATTTTCAAAGTTGAAAGATATGCAAGCTGCACTTTCAAAGCCTAGTATACTTTTTGGATTTCTAAACCTAAGTTTTTTTCCCACTAAGGAAAGCAAAGAGATGTGGAGGTTGAAGAAGGAGGTGGACGAGTTGGTAATGAACATCGTATGTAATCGTGAAATACAAAACAGAGAGAACAATTTAAACGAGAAACGGAGCGATCTATTACAAAAAATACTAGAAGGTGCTGCAAATGACACAAGTTTAAAAGACGTCGTGCAGAACAAGAATCGAACGATTATAGATCTCTGCAAAAATATATACTTTGCTGGCTCTGAGTCAACTGCTCTCGCAATTACTTGGACATTGCTGATGCTTGCATTACATCCAGAATGGCAACAACGCGTCCGATCTGAAATTTTGGATACTTTCGATAACAGTTCGCCTCGTTTTTTTCGTGACTCTACCAAACTTCAAAAATTGAAAGTGCTAACAACTGTGATTCAAGAGAGTTTACGTCTCTACGGACCTGGAGTATTTGCGACAAGGGAAGTTTTAGCTGATATGAAGTTGGGAGAGTTCGTGCTCCCTAAAGGCATATTTACGTGGTTGTTCATTCCGTCGCTGCATCGCGACATTGATAATTGGGGTACAGATGCTACAAAATTCAAGCCGGAAAGATTTGATAATGGTGTTTCTGCAGCTTGTAAGTATCCTCAGGCATATATACCATTTGGACTTGGGAGTCGAAGTTGTCTCGGTCAAAACTTTGCGATTACGCAGATGAAGATAATACTGAGTCTTCTTATTTATAATTTCTCCTTTGAGGTTTCACCAAATTATAGGCATTTTCCTGTCTATAATATGTTGTTGATGCCAAAATATGGTCTGAAGCTTCTTGTTACCAAGGTTGATAGTTCGGGAAAATGA 1599 0.3859 MELEYQWVMGKLWWTVGLIVISSVIILVEKVLLKPRRIRSVIEKQGINGPKPSFPYGNISEMQQIRPQPSASADPYQEWIHSLFPYFQTWKQRYGSVYLYSTGLKQHLYVGKPELIKDINLHTSLDLGRPSYLSKPLMPMLGNGILRANGQLWSFQRNLIVPEFFMSKIKNMIDIMEESTLTIIKKWETCITENKEKIAEIVIEVDLKILTEDIISKACFGSDYTQGKQIFSKLKDMQAALSKPSILFGFLNLSFFPTKESKEMWRLKKEVDELVMNIVCNREIQNRENNLNEKRSDLLQKILEGAANDTSLKDVVQNKNRTIIDLCKNIYFAGSESTALAITWTLLMLALHPEWQQRVRSEILDTFDNSSPRFFRDSTKLQKLKVLTTVIQESLRLYGPGVFATREVLADMKLGEFVLPKGIFTWLFIPSLHRDIDNWGTDATKFKPERFDNGVSAACKYPQAYIPFGLGSRSCLGQNFAITQMKIILSLLIYNFSFEVSPNYRHFPVYNMLLMPKYGLKLLVTKVDSSGK* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2882 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Psa1g2882 532 Pfam Cytochrome P450 83 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 522 - -
Psa1g2882 532 SUPERFAMILY Cytochrome P450 79 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 Coils Coil 281 301 - -
Psa1g2882 532 Gene3D Cytochrome P450 34 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 522 - -
Psa1g2882 532 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2882 532 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2882 Psa-Chr1 254057536 254061111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2882 115 524 Cytochrome P450 AT5G24900 42.067 6.13e-122 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2882 - - gmx:100801472 655.595