Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2833 TACCACAAATGATGCTGAGTTTGGTAGCAGAGGCACTGCTGAATTTGTTATTATTATGGAAAACATATCTGGAGCTGCTATCAAAACTACCGCAAATTCCAATGACAGAAAAAACAAAATAACAGCAGCAAGCCAAATGGAATTACTCAAATTACCAAAACTTCCAGCAACAGCTGTAAACGAAGCCCGTGTTCGAGAAATGAAGAAGGTTGGGGTGACAGTGTTGGGATCTGTTGAAGAAATTCAAACCAAAATATTAAAGAGACAGGAGGCTGCAGCAAAACGCGAGAAAGCCATGGCATATGCTCTAGCTCATCAACGGCAGGAGCAGTCTTGTGAAGATCCTATTGAAGAGTTGCTGTATGCAGTTTTTGTTGTTTCAAATGAAAATACATCTGTTGCGGAGTTGGCAACAACCTACAGGCTGACTTATCACAACTGCAGGCTGCTGCATCATTGGAGATGCAGTCATGATATGAGGAAGAAACTTGCACATTGCCTAGCACTGCTTCCAAAATTAAAAGGGGATATCTCTAATGAACATCCAGCTTCTGCAGACAATGGTGGTTTGACCAAGTTAGTGAGAAATTCTGCTGATGCTAGCGGCAATGTCTAA 616 0.4172 TTNDAEFGSRGTAEFVIIMENISGAAIKTTANSNDRKNKITAASQMELLKLPKLPATAVNEARVREMKKVGVTVLGSVEEIQTKILKRQEAAAKREKAMAYALAHQRQEQSCEDPIEELLYAVFVVSNENTSVAELATTYRLTYHNCRLLHHWRCSHDMRKKLAHCLALLPKLKGDISNEHPASADNGGLTKLVRNSADASGNV* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2833 204 PANTHER IQ CALMODULIN-BINDING MOTIF FAMILY PROTEIN, EXPRESSED 36 116 - -
Psa1g2833 204 PANTHER IQ-DOMAIN 5-RELATED 36 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2833 Psa-Chr1 246170819 246173018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2833 60 108 IQD Protein Family AT3G22190 67.347 3.15e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2833 - - qlo:115982339 70.0922