Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2822 ATGAAAAGCAAAAGCAGCAACACAACAACCCAAAACAGTGGGAGACGGCATACAAGCCAAATGCAAAAAGTTGCTATGTACCAAGTATCCAAAACTGCTGCCAACCCCGCTGGAGGACGGTATGATAAGTCTAAGCCGCTGAAGTACAATGTGGCTCTTCCACCGGCTACACTTTCAAGGTTTGATCTTATGTACATTATGATTGATGACCCGGACGATAATACAGATTACCACATAGCTTCTCACATTGTACGGGTTCATCAAAAGCGTGAAGATGCTCTTGCTCCGACATTCACTACAGCAGAACTGAAGCGTTATATAGCCAACCTCAGCATATTCGACCCACAAGTCACCGAAGACCAAGTCCAGAGGGATCTGTCAATGAACAAATTTGATTGGGACCATCCACTCCGCTTGTAA 420 0.45 MKSKSSNTTTQNSGRRHTSQMQKVAMYQVSKTAANPAGGRYDKSKPLKYNVALPPATLSRFDLMYIMIDDPDDNTDYHIASHIVRVHQKREDALAPTFTTAELKRYIANLSIFDPQVTEDQVQRDLSMNKFDWDHPLRL* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2822 139 MobiDBLite consensus disorder prediction 1 22 - -
Psa1g2822 139 Gene3D - 29 129 IPR027417 -
Psa1g2822 139 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 33 121 IPR031327 GO:0003677|GO:0005524|GO:0032508
Psa1g2822 139 Pfam MCM P-loop domain 32 87 IPR001208 GO:0003677|GO:0005524|GO:0032508
Psa1g2822 139 PANTHER DNA REPLICATION LICENSING FACTOR MCM6 33 121 - -
Psa1g2822 139 ProSiteProfiles MCM family domain profile. 33 83 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2822 Psa-Chr1 243846320 243846739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2822 33 118 Core DNA Replication Machinery Family AT5G44635 73.256 5.78e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2822 K02542 - gmx:100794021 150.984