Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2814 ATGGCCGAGGCAAATACAGTTGAAGGGATTTTGGATTTTTTGAGGAGGAACCGGTTTACACGAGCTGAGGCAGCTTTCCGAAGTGAGCTCAATAACTGTTCTGATGTAAATGGGTTCCTACAGAAGCTTACCTTGGAAGAAAAGAACTTGTGTGATTTGCCGCAGAATGATAAGGGGAAGTTAGCGGTAGAAAATCGAGGGTTGGATTCTCGTGATAACGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATTGAGTGTGGAACTGGTAGAAATACTACTGAGAGCAAATGGAAAAATGCCACTCCCACTGAGGAAAGGAATAAATCTAATGAAGTTGTTGGAACGAGTGGTACAAATTTCACTTTCTTGAAGAGTTCAGAGGACAGTGTGTTTGATTTACAATCGTGGAAGATCAATGGTCCTGCAGAGGTTTATCAAAATGACAGTGGAAGCAAGGCTAGTAATAATACTTTGAAGGCTTCGATTTCTCAGCAATCGAAAAATCAAACGAGTGAGACATTTGATGCAGCCAACAGTAATGTAAAAACTACAGAGGAAAATAGTGTGTCCGCCGAGAAAAAATCCTCGTTGCTTGGAAGTAGTAGTAGTGGTAAAGCCTCTACGGAACCAAAGTTTAACATTGCACAAAACAAAGAATCTAAGGAAATTGATCGGCAGCAACTTAAATTTAATAGTTCGTCGCTTAAAGAGAATTTGGCAGATAACGTCGTGTTGAGAGCTGACGAGAACGCCAATTCATCTTCTGAAGTATGGAAAGATTGTTCCATCAAGACTGTTTTCCCTTTCTCAAAAGGGGATGTGTCTACAAGCTATAGCAGTTCAAATTATTCTGAAAAAGTTGATGAAAAGAGAAAGTCAGAAATCAGTGACGCGAGGGCTTATATAAAAGAGCAGGTGGATGAAGTCGGGAGAGCTTTTTACTTGGCGAAATTGCAAGGAAGTTCTGAACAGAATAACATTAGTGCCTTAACTTTTCCTATTGCACCAGAGAAGCATAAGGAAGAGTATCCAAGGCTTCCACCTGTAAGAATTAAGTCTGAAGATAAGTCCTTGACTATTAATTGGAGCGAGAAGTTTGAATCTGACGGATTGGCTGCAAAGCTCGCTAGTGCTGACAGCAGCTTACTTATTGGATCATATCTGGATGTGCCTATTGGACAAGAAATTAAAAATGCAGGTATGAGGAAGGCTACAGGGGGAAGTTGGCTGTCCGTAAGTCAAGGAATATCAGAGGATACATCTGATCTTGTATCAGGTTTTGCTACCGTTGGTGATGGGTTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAGTATGATGACGACGACGATGTTGGATACATGAGACAACCTATTGAGGACGAGGCCTGGTTTCTGGCGCATGAAATTGATTACCCTAGTGACAACGAAAAGGGGACTGGACATGGAAGTGTTCCTGATCCTCAGGAAAGAGGTCAAGCCAAAGACGAGGACGATGATCAATCTTTTGCTGAAGAAGATTCTTACTTCTCTGGAGAGCAATATCTTCAAGCTAAGAATGTTGAGCCTGTCACGGGTTCAGATGATCCTATTGGTATAACGGTTACTAATATGTATGGAAGGGCTAATGGAAATGATTTAATGGCTCAATATGACGGAGAACTGATGGATGTAGAAGAGCTGAATCTTATGCACGCAGAACCTGTCTGGCAAGGCTTTGTTCCTCAGACAAATGATCTAATCATGATGGGAGATGGAAAAGTCTTGAATCATAGTGGAAGATCACGGCTTGAAGAAATGGAAGATGATCAACACGGTTCAGTTAGGTCAATCGGGGTGGGTTTCAACAGTGATGCTGCTGATATCGGCAGTGAAGTCCATGGAAGTTTTATTGGTGGCAGTAGTGAAGGGGATTTAGAATATTTTCGGGATCGTGATAGTGGACTTGGGGGATCCAAACACTCTCATCGTGATTTTGGTAAGAATTCTATCGACAAATCATTCAAAAATAAGAAAAATGATTTGATTGAGTCGAATAAATATGTCATTGGAGGTCATAAAGATGCACATTCCCAAATAAAAACACATACCGAAGGCAACTTTTCATTCCCTCAATCTGTTAATGATAGCCAGATAATTCAAGGTGGTTCCAGTAAGACTCCATGGTCAAATAATTGTAATAATGCGGATGAAAACGATGACTGTATTAATGCTTTTGAGGGATCTGATGAAATGCTTTCATCTTGGAGGCAGAAGAGTAGTGATTCTTCACCCGAGAAAAGTTCTAGGGATGAGAATAACGCTAATGCGGTTAGATCCTCAAACTCTTCCCCAACTACTGTCGATGATTATGTGTACGCTGATAAAGAGCGTGTCAAGCTAGAAAAGGAGGATGAAGAGGTTGACATTACAAGGGAAGATGATTTAGGCGTATCACAAGAAGATGAAGAGATTGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGCCGCTATCATGTCACCGAGTATCTGGGATCTGCTGCATTCAGTAAAGCGATTCAAGCTCATGACCTGCATACAGGCGTGGATGTTTGTATTAAAATTATAAAGAACAACAAGGATTTTTTTGACCAAAGCCTTGATGAGATCAAACTTCTCAAGTATGTCAATAAACATGATCCTGGAGACAAGTATCACATTTTGCGATTATATGATTACTTCTACTATCGAGAACATTTGTTAATAGTATGTGAACTACTCAAAGCCAACTTATATGAGTTTCATAAATTTAACAGAGAATCAGGAGGGGAAGTTTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAATATTTACATAACCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTATAGCCGATGCGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAAACAGATCACCTTTGCTCATATGTTCAGTCCAGGTCCTATCGTGCTCCCGAGGTTATTCTCGGGCTTTCATATGACAAGAAGATTGATATCTGGTCCCTTGGATGCATCCTGGCAGAACTTTGTACTGGCAATGTCTTATTCCAAAATGATTCCCCTGCAACATTACTAGCTAGGGTAATCGGTATTATCGGTCCAATTGGTCAAAGTATGCTAGCAAAAGGACGGGATACATATAAGTACTTCACAAAAAATCATATGCTTTATGAAAGGAATCAGGAAAGCAACAGGTTGGAATACCTGATTCCGAAAAAATCGTCCTTGAGGCATAGATTACCAATGGGGGACCAAGGTTTCATTGACTTTGTTGCTCATTTGCTCGAGGTTAACCCGAAGAAGCGGCCTTCTGCATCCGAGGCTCTAAAGCACCCGTGGTTATCATACCCTTATGAACCAATATCATCTTGA 3558 0.4044 MAEANTVEGILDFLRRNRFTRAEAAFRSELNNCSDVNGFLQKLTLEEKNLCDLPQNDKGKLAVENRGLDSRDNVEVSKELIVKEIECGTGRNTTESKWKNATPTEERNKSNEVVGTSGTNFTFLKSSEDSVFDLQSWKINGPAEVYQNDSGSKASNNTLKASISQQSKNQTSETFDAANSNVKTTEENSVSAEKKSSLLGSSSSGKASTEPKFNIAQNKESKEIDRQQLKFNSSSLKENLADNVVLRADENANSSSEVWKDCSIKTVFPFSKGDVSTSYSSSNYSEKVDEKRKSEISDARAYIKEQVDEVGRAFYLAKLQGSSEQNNISALTFPIAPEKHKEEYPRLPPVRIKSEDKSLTINWSEKFESDGLAAKLASADSSLLIGSYLDVPIGQEIKNAGMRKATGGSWLSVSQGISEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGQAKDEDDDQSFAEEDSYFSGEQYLQAKNVEPVTGSDDPIGITVTNMYGRANGNDLMAQYDGELMDVEELNLMHAEPVWQGFVPQTNDLIMMGDGKVLNHSGRSRLEEMEDDQHGSVRSIGVGFNSDAADIGSEVHGSFIGGSSEGDLEYFRDRDSGLGGSKHSHRDFGKNSIDKSFKNKKNDLIESNKYVIGGHKDAHSQIKTHTEGNFSFPQSVNDSQIIQGGSSKTPWSNNCNNADENDDCINAFEGSDEMLSSWRQKSSDSSPEKSSRDENNANAVRSSNSSPTTVDDYVYADKERVKLEKEDEEVDITREDDLGVSQEDEEIAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGVDVCIKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQYLHNLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIGQSMLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKSSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2814 1185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1000 1012 IPR008271 GO:0004672|GO:0006468
Psa1g2814 1185 MobiDBLite consensus disorder prediction 751 789 - -
Psa1g2814 1185 SMART serkin_6 874 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2814 1185 MobiDBLite consensus disorder prediction 480 510 - -
Psa1g2814 1185 Coils Coil 816 846 - -
Psa1g2814 1185 MobiDBLite consensus disorder prediction 94 113 - -
Psa1g2814 1185 SUPERFAMILY Protein kinase-like (PK-like) 863 1178 IPR011009 -
Psa1g2814 1185 MobiDBLite consensus disorder prediction 158 215 - -
Psa1g2814 1185 CDD PKc_DYRK_like 874 1176 - -
Psa1g2814 1185 ProSiteProfiles Protein kinase domain profile. 874 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2814 1185 PANTHER - 2 1183 - -
Psa1g2814 1185 Pfam Protein kinase domain 874 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2814 1185 MobiDBLite consensus disorder prediction 772 787 - -
Psa1g2814 1185 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1183 - -
Psa1g2814 1185 Gene3D Transferase(Phosphotransferase) domain 1 928 1176 - -
Psa1g2814 1185 MobiDBLite consensus disorder prediction 158 226 - -
Psa1g2814 1185 Gene3D Phosphorylase Kinase; domain 1 868 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2814 Psa-Chr1 242718355 242727693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2814 873 1171 MAP Kinase Gene Family AT5G19010 31.975 6.55e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Psa1g2814 Pkinase 1.3e-51 CL0016