Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2798 ATGCTGCCACGTGCGACTTTGTCAAGTACAATGCAGAGTCGAATGCTGCTCATGCTATACCTTGCTTACATGGGAGAGAGAGTGTCGGTTGCTGAAGGTAGAATTGTCGAGCAAAAAGTCCTCGAGTCAAATCCCGTCCTAGAAGCTTTTGGCAATGCAAAGACTGTGAGGAACAATAATTCGAGTCAGTTTGAAGATGATGGTGGCAGAACCGATGTTTTGGATGACGAAATAGAGGCTCCAGATGACAAAT 253 0.4545 MLPRATLSSTMQSRMLLMLYLAYMGERVSVAEGRIVEQKVLESNPVLEAFGNAKTVRNNNSSQFEDDGGRTDVLDDEIEAPDDK 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2798 84 MobiDBLite consensus disorder prediction 58 84 - -
Psa1g2798 84 ProSiteProfiles Myosin motor domain profile. 1 84 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa1g2798 84 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 64 IPR027417 -
Psa1g2798 84 Gene3D Kinesin motor domain 10 66 IPR036961 -
Psa1g2798 84 PANTHER MYOSIN 16 64 - -
Psa1g2798 84 Pfam Myosin head (motor domain) 16 64 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa1g2798 84 MobiDBLite consensus disorder prediction 70 84 - -
Psa1g2798 84 PANTHER MYOSIN FAMILY PROTEIN WITH DIL DOMAIN 16 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2798 Psa-Chr1 241214583 241215374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2798 12 64 Myosins gene family AT5G43900 81.132 2.30e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2798 K10357 - gmx:100795648 87.4261