Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2795 ATGCAGAAGTTAACGAATCTCAAAGTTTTGAACTTTAAAGATTCTGAATATTTAACGCATATACATGATATATCGGGCTTATCAAATTTAGAGGAATTATCGATGGAAAATTGTAAGAATTTACTTACAATCCACAATTCTGTTGGGCACTTGAACAAACTCAAAGACTTGAATGCTAAGGGTTGCATCAAGCTCCAGAGTGTTCCACCCTTAAAGTTGATCTCTCTTCAAAAATTGAAACTTTCAGGTTGTGAGAGTCTTAAAAGTTTTCCAGAAATATTAGGAGAGATGCAACATATAACATTCATTGAATTGCGTGAAACTTCCATAGAAGAATTTCCACTTTCATTTCAAAATCTCACTGGCCTTTGCCTTTTAGAAATAGTTGGAAATGGAAGAGTTAGGTTATCGAGTAGCAGTCTTATGATGTCAAATTTAAAGAAGGTTGATGTCAAAAATTGTCATCTATTATTGCCAAAAGAAAATGATAAATTCAGTTCTGAGATGTTTTCAAAAGTGAGATCTCTACACCTCTTTAACTCCAACCTGTCAGATGAATCTCTTCCAAACTTTCTTACTTTATTTGCTAATGTACAAAAATTAGACCTGTCGGCGAATCATTTCACAATTCTTCCCGAATGCCTCAAAGATTGTGACTTTTTATATAAGCTTTGTTTAGATGATTGCAAGAATCTGAAGGAAATTAGAGGAATTCCACCGAATTTAAAATATTTCTCTGCACAATCTTGCGTTTCTTTGACATCATCATCTAGAAGGCTGCTATTAAATCAGGAATTGCATGAGGCTAGAGGCACCTACTTCTATTTTCCTTCAGGAACCGAGAGGATACCAGAGTGGTTTGAGCACCAACGTAATGGACCTTCAATTACTTTTTGGTTTCGTAACTACCTCCGTTCCGCTGCTCTCTTATTTTTGACTAAGTTGAAGCATGGGGCTGACACGTCGGATTGCTTAGCAAAAATCAAAATGTTCATCAATGGCTATAGATTTAATGAGCTTATGTTTTTAATTAGGCCTGAGATTCAATCGGGGCATGCCTATCTATTTGATATGAACCTGCATAGTTGGGTATACCACGGGTCTAGTTGCGGAAATAAAAACGAGAATATCTGGAGCATGAAATTCGTACTAGAGGAAGCACTTTCAAAAAATGAGTGGAACCATGCCGTGGTTATATGCACCCATGAGATGAAGGATTTATTGCGCATAGAAAGTGGAATCCACATATTCAAAGAGAAAAATAGCTCGGAGAATATTCGATTTAGCAATCCTTATAAGAAGAGTAGATTTGTAGATGCATAG 1323 0.3605 MQKLTNLKVLNFKDSEYLTHIHDISGLSNLEELSMENCKNLLTIHNSVGHLNKLKDLNAKGCIKLQSVPPLKLISLQKLKLSGCESLKSFPEILGEMQHITFIELRETSIEEFPLSFQNLTGLCLLEIVGNGRVRLSSSSLMMSNLKKVDVKNCHLLLPKENDKFSSEMFSKVRSLHLFNSNLSDESLPNFLTLFANVQKLDLSANHFTILPECLKDCDFLYKLCLDDCKNLKEIRGIPPNLKYFSAQSCVSLTSSSRRLLLNQELHEARGTYFYFPSGTERIPEWFEHQRNGPSITFWFRNYLRSAALLFLTKLKHGADTSDCLAKIKMFINGYRFNELMFLIRPEIQSGHAYLFDMNLHSWVYHGSSCGNKNENIWSMKFVLEEALSKNEWNHAVVICTHEMKDLLRIESGIHIFKEKNSSENIRFSNPYKKSRFVDA* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2795 440 Gene3D Ribonuclease Inhibitor 90 270 IPR032675 -
Psa1g2795 440 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 317 IPR044974 GO:0006952
Psa1g2795 440 SUPERFAMILY L domain-like 2 263 - -
Psa1g2795 440 Gene3D Ribonuclease Inhibitor 1 89 IPR032675 -
Psa1g2795 440 PANTHER NB-ARC DOMAIN PROTEIN 12 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2795 Psa-Chr1 241175577 241177719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2795 4 201 WRKY Transcription Factor Family AT4G12020 31.500 2.56e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2795 - - mtr:MTR_1g060030 362.459