Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2791 ATGAAAAATCTCAAAACACTTATTATTAAACAAGGTTGTTTTTCTAAATGTCCGACAAGTTTTCCAAATAGTTTGAGAGTATTGGAATGGCAAAGATATCCTTCACGGTATATACCAACTAACTTTTGTCCTAAAAAACTGATCATATGTAAGTTACCCAATAGCTGCTTGACCTCGTTGGAATTGGCTAGCTTTTTGAACCAGAAGTTAACGAATCTCAAAATTTTGAACTTTAAAGATTCTGAATATTTAACGCATATACATGATATATCGGGCTTATCAAATTTAGAGGATTTATCGATGAAAAATTGTAAGAATTTACTTACAATCCACGATTCTGTTGGACACTTGAATAAACTGAAAATTTTGGATGTCGGGGGTTGCATCAAGCTCCAGAGTTTTCCACCCTTGAAGTTGAGCTCTCTTCAAAAATTGAAACTTTCAGGTTGTGAGAGTCTTAAAAGTTTTCCAGAAATATTAGGAGTGATGCAATACATAAAATCCATTGAATTGGATAAAACTTCTATAGAAGAATTTCCATTTTCATTTCAAAATCTCACTGGCCTTTCCCTTTTAGAAGTATTTGGAAATGGAAGAGTTAGGTTATCGAGTAGCAGTCTTATGATGTCAAATTTAAAGAAGGTTGATGTCAAAAATTGTCATCTATTATTGCCAAAAGAAAATGATAAATTCAGTTCTGAGATGTTTTCAAAAGTGAGATCTCTACACCTCTTTAACTCCAACCTGTCAGATGAATCTCTTCCAAAATTTCTTAATTTATTTGCTAATGTGCAAAAATTAGACCTGTCGGCCAATCATTTCACAATTCTTCCCGAATGCCTCAAAGATTGTAACTTTTTATATAAGCTTTGTTTAGATGATTGCAAGAATCTGAAGGAAATTAGAGGAATCCCGCCGAGTTTAAAATATTTCTCTGCACAATCTTGCAATTCTTTGACATCATCGTCTAGAAGCATGCTACTAAATCAGGAATTGCATGAGGCTAGAGGCACCTACTTCTATTTTCCTTCAGGAACCGAGAGGATACCAGAGTGGTTTGAGCACCAACGTAATGGACCTTCAATTACTTTTTGGTTTCGTAACTACCTCCCTTCCGCTGCTCTCTTATTTTTGACTAAGTTGAAGCATGGGGCTGACACGTCGGATTGCTTAGCAGAAATCAAGATGTTCATCAATGGCTATAGATTTAATGAGCTTATGTTTTTAATTAGGCCCGAGATTCAATCGGGGCATGCGTATCTATTTGATATGAACCTGCATAGTTGGGTATACCTGCATAGTTCCGAAAATAAAAACGAGAATATGTGGAGCATGAAATTCATGCTAGAGGAAGCACTTTCAACAAATGAGTGGAACCATGCACTGGTTATATGCACCCATGAGATGAAGGATTTATTGCGCATAGAAAGTGGAATCCACATATTCAAAGAGAAAAATAGCACGGAGAATATTCGATTTAGCAATCCTTATAAGAAGAGTAGATTTGTAAATGTATAG 1518 0.3531 MKNLKTLIIKQGCFSKCPTSFPNSLRVLEWQRYPSRYIPTNFCPKKLIICKLPNSCLTSLELASFLNQKLTNLKILNFKDSEYLTHIHDISGLSNLEDLSMKNCKNLLTIHDSVGHLNKLKILDVGGCIKLQSFPPLKLSSLQKLKLSGCESLKSFPEILGVMQYIKSIELDKTSIEEFPFSFQNLTGLSLLEVFGNGRVRLSSSSLMMSNLKKVDVKNCHLLLPKENDKFSSEMFSKVRSLHLFNSNLSDESLPKFLNLFANVQKLDLSANHFTILPECLKDCNFLYKLCLDDCKNLKEIRGIPPSLKYFSAQSCNSLTSSSRSMLLNQELHEARGTYFYFPSGTERIPEWFEHQRNGPSITFWFRNYLPSAALLFLTKLKHGADTSDCLAEIKMFINGYRFNELMFLIRPEIQSGHAYLFDMNLHSWVYLHSSENKNENMWSMKFMLEEALSTNEWNHALVICTHEMKDLLRIESGIHIFKEKNSTENIRFSNPYKKSRFVNV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2791 505 Gene3D Ribonuclease Inhibitor 1 154 IPR032675 -
Psa1g2791 505 PANTHER NB-ARC DOMAIN PROTEIN 1 383 - -
Psa1g2791 505 SUPERFAMILY L domain-like 2 353 - -
Psa1g2791 505 Gene3D Ribonuclease Inhibitor 155 355 IPR032675 -
Psa1g2791 505 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 383 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2791 Psa-Chr1 241092188 241094579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2791 21 220 WRKY Transcription Factor Family AT4G12020 33.816 1.69e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2791 - - mtr:MTR_0038s0060 436.802