Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2781 ATGGTTATCTCATCAACTGTCAAACATCCAGATGAACATAATGAAAGCATAGACTGTACTTTTGCTTCTAGATACGTGCGTGAAGCAGTTCCAAAGTTCAAGCTGGCAGAGAGTTCTATACCAAAAGATGCAGCATATCAGATAATAAACGATGAGTTGATGTTAGATGGGAAACCAAGGCTTAACTTGGCTTCATTTGTCACTACTTGGATGGAACCTGAGTGTGATAAACTCATCATGGATTCACTTAACAAGAACTATGTTGATATGGATGAGTATCCTGTCACCACTGAGCTTCAGAATAGGTGTGTGAATATAATAGCACATCTATTCAATGCTCCTATTGGTAAAGAGGAAACAGCAGTAGGTGTTGGGACTGTAGGATCATCAGAAGCAATAATGTTAGCTGGTTTAGCTTTTAAAAGGAAATGGCAGACAAAGAGAAAATCAGAAGGCAAACCTTACGATAAGCCCAACATCGTTACCGGGGCTAATGTGCAGGTTTGTTGGGAAAAATTTGCCAAGTACTTTGAGGTTGAACTAAAGGAAGTGAAACTCTCGGAAGGATACTATGTGATGGATCCATTGAAAGCAGTTGAAATGGTAGATGAGAACACTATCTGTGTTGCACATATCTGTGTCCAGCCTTTTGGTCAAACGCTTGACCTGGAACGTGTTGAGGATGTGAAGCTTCTTAACGAACTTCTTACTGTAAAGAACAAAGAGACGGGATGGGATACGCCGATTCATGTAGATGTGCCGAGCGGTGGTTTTGTTGCTCCGTTCTCTACCCTGATCTGCTATGGGATTTTCGCTTGCCATTGGAATCAAGATGACTTGCCGGATGATCTTGTTTTTCATATCAATTATCTTGGATCTGATCAGCCAACTTTCACATTGAATTTCTCCAAAGGATCGAGTCAAATCATTGCTCAATACTACCAATTCATACGACTTGGATTCGAGGGCTACAAAAGTGTGATGGAAAATTGCTTGGCGAACACGAGAATTCTGAAAGAAGGAATTGAGAAAACTGGAAAGTTTAAGATTGTGTCCAAGGACGTCGGCGTGCCACTTGTAGCGTTCTCGTTGAAAGACAGTAGCCGGCACACGGTATTCGAGATAGCAGACCATTTGAGAAAATACGGGTGGATAGTTCCGGCCTACACAATGCCTGCGGACGCGCAACACATTGCAGTCCTGCGAGTGGTGATCAGGGAGGATTTTAGCCGCAGCTTGGCTGAGAGACTTGTTTCTGATATTTGCAAAGTTGTGGCTCTCTTGGAGACAATTCCAAGTACCATCTCCTCGAAAAGTGCTCATGTCGCGGTTATCGCGAGTGAGACAAGCGAGGAGGTTAAGAAAGATATTACAGAGACTCAAACTGAGATTGCAAGTTATTGGAAGAAGCTTGCTACAGGAAAGAGAGTTGGAACATGCTAG 1443 0.4276 MVISSTVKHPDEHNESIDCTFASRYVREAVPKFKLAESSIPKDAAYQIINDELMLDGKPRLNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGKEETAVGVGTVGSSEAIMLAGLAFKRKWQTKRKSEGKPYDKPNIVTGANVQVCWEKFAKYFEVELKEVKLSEGYYVMDPLKAVEMVDENTICVAHICVQPFGQTLDLERVEDVKLLNELLTVKNKETGWDTPIHVDVPSGGFVAPFSTLICYGIFACHWNQDDLPDDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKSVMENCLANTRILKEGIEKTGKFKIVSKDVGVPLVAFSLKDSSRHTVFEIADHLRKYGWIVPAYTMPADAQHIAVLRVVIREDFSRSLAERLVSDICKVVALLETIPSTISSKSAHVAVIASETSEEVKKDITETQTEIASYWKKLATGKRVGTC* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2781 480 Pfam Pyridoxal-dependent decarboxylase conserved domain 42 266 IPR002129 GO:0016830|GO:0019752|GO:0030170
Psa1g2781 480 Pfam Pyridoxal-dependent decarboxylase conserved domain 273 365 IPR002129 GO:0016830|GO:0019752|GO:0030170
Psa1g2781 480 Gene3D - 69 344 IPR015421 GO:0003824
Psa1g2781 480 Gene3D - 345 432 - -
Psa1g2781 480 SUPERFAMILY PLP-dependent transferases 8 426 IPR015424 -
Psa1g2781 480 PANTHER GLUTAMATE DECARBOXYLASE 1 262 IPR010107 GO:0004351|GO:0006536|GO:0030170
Psa1g2781 480 PANTHER GLUTAMATE DECARBOXYLASE 272 480 IPR010107 GO:0004351|GO:0006536|GO:0030170
Psa1g2781 480 Gene3D - 1 68 - -
Psa1g2781 480 PANTHER GLUTAMATE DECARBOXYLASE 272 480 - -
Psa1g2781 480 PANTHER GLUTAMATE DECARBOXYLASE 1 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2781 Psa-Chr1 240746433 240748977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2781 1 476 Calmodulin-binding Proteins AT2G02010 68.200 0.0 684