Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2761 ATGTCGGTTCTCCCTAGTGTCCAGCCATTCCATGAAATAGCATATCCGATGTGGTTGACATCAGCTATCTGTGAGATTTGGTTTGCGTTATCCGGGATTTTGGATCAGTTTCCAAAGTGGTCGCCCATTAACCGTGAGATTTATCTTGACAGGCTTGCTATAAGATATGATCGTGATGGAGAACCATCACAGTTGGCCCTTATTGACGTTTTCATCAGTACAGAGAACCCTCTCAAGGAGCCGCCTCTTATCACTGCAAATACTGTTTTGTCTATACTCTCCGTTGATTACCCTGTCGACAAGGTTTCCTGCTATGTATCAGATGATGGTTCAGCTATGCTGACTTTTGAAGCCTTATCAGAAACAACTGAGTTTGCAAAGAAGTGGTTGCCTTTTTGCAACAAACACAATATTGAGCCTAGTTCCCCTGAGGCTGATGAAAGCAAATTGCCGTTACAGTTAGCAATGGTAGGACGCCTCAATGTTACGTCATCTGCTCAGGACCTTCCCATGCCGTATGGTTATAAATCTAACATATCGTTTGGTTGCTGCATGTTTGAAATTGTTGCATATCAACCAGCATTTCACGCTCCGAACAACGCTGAAGTTATCAATAAAATAAGTAGATCCGCTATTTCTCCATTGCCAATTGCTTACTCTCTCACACTGAAACAATTTATCAAGAGCATGTTGAGGAAAAATCCTGAACACAGACCAACAGCGGCTGATTTGTTGAGACATGCACTCAACATCTCAAATGTCGGCACACTATGCTGA 777 0.4273 MSVLPSVQPFHEIAYPMWLTSAICEIWFALSGILDQFPKWSPINREIYLDRLAIRYDRDGEPSQLALIDVFISTENPLKEPPLITANTVLSILSVDYPVDKVSCYVSDDGSAMLTFEALSETTEFAKKWLPFCNKHNIEPSSPEADESKLPLQLAMVGRLNVTSSAQDLPMPYGYKSNISFGCCMFEIVAYQPAFHAPNNAEVINKISRSAISPLPIAYSLTLKQFIKSMLRKNPEHRPTAADLLRHALNISNVGTLC* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2761 258 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING] 13 145 - -
Psa1g2761 258 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 13 145 - -
Psa1g2761 258 Gene3D Transferase(Phosphotransferase) domain 1 103 255 - -
Psa1g2761 258 Pfam Cellulose synthase 68 145 IPR005150 GO:0016020|GO:0016760|GO:0030244
Psa1g2761 258 SUPERFAMILY Protein kinase-like (PK-like) 171 248 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2761 Psa-Chr1 239006005 239006781 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2761 14 144 Glycosyltransferase AT4G32410 83.206 2.31e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Psa1g2761 Cellulose_synt 6.4e-41 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2761 K10999 - aof:109845371 243.047