Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2759 ATGGCTCATAAGCTAGCAAAGACTAAGGATGGTTCTAAACATAAAGGAAATGATAGTTCCTCATCTACTGCTATAGAAACTCCCCTCTCATTGGTATCTCGAATGTGTATTAAGGAGTTTGAAGAAAAGTACAAGGATAGGCTAGTGTTAAAACAATATATGTGGAAAGCCAAATTTGTTGCTCAATTGGCTCTTCCTAGTGTTGCTGAGTTGGTCTCTCATCAGAAGATTGACTACTTTTTGCAACTTGCACAAGATTACAATGAGGATCTTATTCGTGTGTTTTATTCCGGGATACATGCAAAGGATGGTTCTCGTTTCAAATTTACCATTGTAAATGTGATTTATGAGTTTACAGATGAATTGTTGAATTCGTTGTTTGGGATAACTATTATTGATCCCGATGTGGGAGATGAACCAAATATGTTGGTGAAAGATGTTTATACCCATGTTGATTATAAAGGGAGTAATACGGCATATTACTTTCTTGCTGGTAAGAATGCTAGAAGAATTTATAACTTTGATGATCCTACTACTTTTGAGAATGAAGGTGAAGAAGAAGGTGTTCATATGGAGGATGAGAATCACACTAGGAATAAACAAAATATCCATGAAGAAGATGCTATGATGCATGATGCACCTATTGTAGATCATCATGGTGCAGATTCTGGCGCTACTAATCTTCCTCCAAATGTCACACTCTTACTTGATGGGAATCCTCTGTGCTCAGATAACACATTCTATCAGTTCTATAAACTTAAAAGAGCTCCACATTTCAATGCATTTGAGGAATATTTGACTTCTAATCTTAAGCTATATGCCAATCAACTGAGCTATGCTTTTGAGTGGCAAGCAACATCTGAAGATAGTAGTCATGCTGCAGTGAAAAGAAAAATCACTAAGAATCAGAGAGAATTTGAATTTGAAGTCAGTATTCTAGGAATAATTCAACACAAAAAATACCGTGTATCCCGTGCTTGGGATGGATCTACTGATCTGGAAACTATTAACACGCAGCAAGTTCATTCAAGCACTTCTGAAAATGCCATGAATTTGTCTTCGGATGTTCATGGTTTGCCCGAAGCTTCGGTATCGGATGCTGAGATCAAGCCAAATGATTTACCTTATCATAATGGTGTTGAACATGTCAATGATTCATACCTCAAACCTGCGGCTATCTATGAGATTTGTTTCGCGTTATCCGGGATTTTGGATCAGTTTCCAAAGTTGTCTCCCATTAACCGTGAGATTTATCTTAACAGGCTTGCTATAAGATATGATCGTAACGGAGAACCATCACAGTTGGCCCTTATTGACGTTTTTGTCAGTACAGAGAACCCTCTCAAGGAGCCGCCTCTTATCACTGCAAATACTGTTTTGTCTATACTCTCCGTTGATTACCCTGTCGACAAGGTTTCCTGCTATGTATCAGATGATGGTTCAGCTATGCTGACTTTTGAAGCCTTATCAGAAACAACTGAGTTTGCAAAGAAGTGGTTGCCTTTTTGCAACAAACACAATATTGAGCCTAGTTCCCCTGAGGCTGATGAAAGCAAATTGCCGTTACAGTTAGCAATGGTAGGACGCCTCAATGTTGCGTCATCTGCTCAGGACCTTCCCATGTCGTATGGTTATAAATATGACATATCATTTGGTTGCTGCGTGTTTGAAATAGTTGCATATCAACCAGCATTTCACGCTCCGAACAACGCTGAAGTTATCAATAAAATAAGTAGATCCGCTATTTCTCCATTGCCAATTGCTTACTCTCCCACACTGAAACAATTTATCAAGAGCATGTTGAGGAAAAATCCTGAACACAGACCAACAACGGCTGATTTGTTGAGACATGCACTCAACGTCTCAAATGCCGGCACACTATGCTGA 1887 0.3895 MAHKLAKTKDGSKHKGNDSSSSTAIETPLSLVSRMCIKEFEEKYKDRLVLKQYMWKAKFVAQLALPSVAELVSHQKIDYFLQLAQDYNEDLIRVFYSGIHAKDGSRFKFTIVNVIYEFTDELLNSLFGITIIDPDVGDEPNMLVKDVYTHVDYKGSNTAYYFLAGKNARRIYNFDDPTTFENEGEEEGVHMEDENHTRNKQNIHEEDAMMHDAPIVDHHGADSGATNLPPNVTLLLDGNPLCSDNTFYQFYKLKRAPHFNAFEEYLTSNLKLYANQLSYAFEWQATSEDSSHAAVKRKITKNQREFEFEVSILGIIQHKKYRVSRAWDGSTDLETINTQQVHSSTSENAMNLSSDVHGLPEASVSDAEIKPNDLPYHNGVEHVNDSYLKPAAIYEICFALSGILDQFPKLSPINREIYLNRLAIRYDRNGEPSQLALIDVFVSTENPLKEPPLITANTVLSILSVDYPVDKVSCYVSDDGSAMLTFEALSETTEFAKKWLPFCNKHNIEPSSPEADESKLPLQLAMVGRLNVASSAQDLPMSYGYKYDISFGCCVFEIVAYQPAFHAPNNAEVINKISRSAISPLPIAYSPTLKQFIKSMLRKNPEHRPTTADLLRHALNVSNAGTLC* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2759 628 PANTHER CELLULOSE SYNTHASE 391 514 - -
Psa1g2759 628 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 391 514 - -
Psa1g2759 628 SUPERFAMILY Protein kinase-like (PK-like) 541 618 IPR011009 -
Psa1g2759 628 MobiDBLite consensus disorder prediction 1 16 - -
Psa1g2759 628 Gene3D Transferase(Phosphotransferase) domain 1 476 625 - -
Psa1g2759 628 MobiDBLite consensus disorder prediction 1 22 - -
Psa1g2759 628 Pfam Cellulose synthase 438 515 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2759 Psa-Chr1 238974463 238980050 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2759 391 514 Glycosyltransferase AT4G32410 79.032 6.73e-58 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Psa1g2759 Cellulose_synt 1.1e-40 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2759 K10999 - aof:109845371 212.231