Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2703 ATGAGGAAAAGAAATCAAAATAGGTCTTTTGATTCACCAACAATTGATCAGCTAGCTAAGGTTTCATACCAAGACTTGCATCGAGGAACTAATGGTTTCTCGACTGAAAACTTGATGGGATCAGGAAGTTTTGGTTCTGTGTATAAAGGAAATCTTGTTTCAGAAGATAATGTTGTTGCTGTAAAGGTGCTGAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAACATAAGACATAGAAATGTAGTCAAGATTTTAACATGTTGTGTTAGTACGGATTACAAAGGTCAAGAGTTTAAAGCTCTAGTTTTTGATTACATGAAAAATGGGAGCTTAGAACAATGGTTGCATCCGGGGTTTCTAAATGTTGAGCATCCAACAACATTACACCTTGGTCATAGATTAAACATCATTATCGATGTTGCATCTGCATTACAGTATCTTCATCAAGAATGTGAGCAATTGGTCATTCATTCTGACTTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATTTCAAGACTTGTCTCAGCCATTGGCGGTACCTCTCATAAGAATACTAGTACAATTGGAATAAAAGGAACTGTTGGCTATACTCCTCCGGAGTATGGAATGGGTTCTGAAGTGTCCACACTCGGTGACATGTACAGCTTTGGAATCTTTCTGTTGGAAGTTCTTACTGGTAGAAGACCCATGGATGAAGCTTTTGAAAATGGTCAAAATCTGCATAATTTTGTTGCAGTGTCATTTCCTGATAATGTTATAAAGATTTTGGACTCACATCTTGTATTTAGAGATGGAGAAGTAGAAATAGAAGATGAAAATCATGAGAATCTTGCTCCCAATGTAGAGGAGGGTTTGGTTTCACTGTTTAGGATTGGACTTACTTGTTCATTTTTCACTGATCACATCTTGTATTTAGAGATGGAGAAGTAG 1017 0.3736 MRKRNQNRSFDSPTIDQLAKVSYQDLHRGTNGFSTENLMGSGSFGSVYKGNLVSEDNVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNVVKILTCCVSTDYKGQEFKALVFDYMKNGSLEQWLHPGFLNVEHPTTLHLGHRLNIIIDVASALQYLHQECEQLVIHSDLKPSNVLLDDDMPSNVLLDDDMVAHVSDFGISRLVSAIGGTSHKNTSTIGIKGTVGYTPPEYGMGSEVSTLGDMYSFGIFLLEVLTGRRPMDEAFENGQNLHNFVAVSFPDNVIKILDSHLVFRDGEVEIEDENHENLAPNVEEGLVSLFRIGLTCSFFTDHILYLEMEK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2703 338 PANTHER LRR RECEPTOR-LIKE KINASE 179 326 - -
Psa1g2703 338 PANTHER LRR RECEPTOR-LIKE KINASE 1 180 - -
Psa1g2703 338 SUPERFAMILY Protein kinase-like (PK-like) 16 267 IPR011009 -
Psa1g2703 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Psa1g2703 338 Gene3D Transferase(Phosphotransferase) domain 1 115 326 - -
Psa1g2703 338 ProSiteProfiles Protein kinase domain profile. 33 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2703 338 Pfam Protein kinase domain 34 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2703 338 SMART serkin_6 33 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2703 338 PANTHER OS04G0122200 PROTEIN 179 326 - -
Psa1g2703 338 PANTHER OS04G0122200 PROTEIN 1 180 - -
Psa1g2703 338 Gene3D Phosphorylase Kinase; domain 1 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2703 Psa-Chr1 232787764 232788931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2703 1 324 Receptor kinase-like Gene Family AT3G47570 46.828 4.05e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa1g2703 Pkinase 3.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2703 - - mtr:MTR_5g025930 514.612