Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2693 ATGTCGCTCAAAAACTTGACAACTTTAACTTGCGCCTGTGAACAATTTGTCTGGTATGATTCCTTCTTCTTTAACAATCTTTCATCACTTATGGGGCTCGTAACAACAAAGAATAACATTCATGGTTCTCTTCCACCCAACTTGTTCCACACCCTTCCCAAGCTCGAACATTTTCTAATTGGAGGGAATCAAATATCAGGCACAATTCCAACTTCAATTATAAATGTATCTTCCTTTGTAGAATTTGATATCAGTCAAAATCAATTTGTAGGACAAGTTCCAACTCTAGGAAAGCAAAAAGATTTGCAACTTCTGAATTTGGAAATCAACAATTTAGGTGACAATTTAACCAATGATTTGGAATTTTTGAAATCTTTGACAAACTGTAGTAAATTATATGTGATTTCTATATCCTTTAACAATTTTGGAGGCATTCTCCCAAATGCCATAGGCAATCTATCCATTGAACTCAATGAACTATATGTTGGGTTTAATATGATAAGTGGAAAAATTCCTGCAGAATTAGGACATCTAATTGGCTTAACTCTGTTGGGCTTGCAATTCAACTACTTTGAAGGAATTATTCCAACTAGTTTTGGGAAGTTACAAAAGATGCAACAGTTAAAATTGGGTGGAAACAAGCTGTTAGGAAATATACCTCCCTTTATAGGCAATCTAAGTCAATTGTATTATTTGGATTTGCATCATAATATGTTTGATGGAAATATTCCCCTAAGTATAGGGAACTGCCAACAATTACAACATCTAGATTTTGCGCAGAATCAGCTTAGGGGAACCATACCTTTAGAAGTTTTTAAGCTTTCTTCTTTATCAAACATGTTGAACTTGTCGCATAACTTTTTGAGTCGAAGCTTACCAAGAGAAGTCGGTATGCTTAAAAATATTGGTGTGCTAGATGTTTCTGAGAATCATCTATCTGGTGATATTCCTACAACAATTGGTGAATGCATAAGTTTAGAACACCTTCTTTTGCAAGCAAATTTTTTTAACGGAACAATACCGTATACTTTGGCTTCTCTCAAAGGTCTTCAGTACTTAGACCTTTCAAGAAATCGATTGAGTGGATCAATTCCTGATGTTATGCAAAACATCTCACTGTTGGAACATTTGAATGTTTCTTTTAACATGTTGGAAGGCCAGGTACCAATAGATGGTGTCTTTGGAAATGCAACCCAAGTAGCAATTATTAGAAACAATAAGCTTTGTGGTGGTATTTTGCAACTGCATCTACCACCATGCTCTATCAAAGGTAGGAAACAAGCAAAACACCATAAATTCAAATTGATAGCAGTGATAGTTAGTGCAGTTTCTTCTCTTCTCGTACTTTTATTTGTTATAACTATCTACTGGATGAGGAAAAGAAATCAAAATAGGTCTTTTGATTCACCAACAATTGATCAACTAGCTAAGGTTTCATACCAAGACTTGCATCGGGGAACTAATGGTTTCTCGACTGAAAACTTGATCGGATCAGGAGGTTTTGGTTCTGTGTATAAAGGAAATCTTGTGTCAGAAGATAATGTTGTTGCTGTAAAGGTGCTGAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTAAAAAACATAAGACATCGAAATTTAGTCAAGATTTTAACATGTTGTGTTAGTACGGATTACAAAGGTCAAGAGTTTAATCGAGATCAAAAACTAATGTACTTTTTACCTTCGAATCTTGTTACCAACCATCCTGAGATTTTAAATGTTGAGCATCCAACAACACTGAACCTCGGTCATAGATTAAACATCATTATCGATGTTGCATCTGCATTACAATATCTTCATCAAGATTGTGATCAAGTGGTCATTCATTCTGATCTAAAGCCAAGCAATGTCCTTCTAGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAGCTATTGGCGGTACCTCTCATAAGAATACTAGTACAATTGGAATAAAAGGAACTGTTGGCTATACTCCTCCGGAGTACGGAATGGATTCTGAAGTGTCCACACTCGGTGACATGTACAGCTTTGGAATCTTTCTGTTGGAAGTTCTTACTGGTAGAAGACCCATCGATGAAGCTTTTGAAAATGGTCAAAATCTGCATAATTTTGTTGCAGTGTCATTTCCTGATAATGTTCTAAAGTTTTTAGACCCACATCTTGTATTTAGAGATGGAGAAGTAGAAATAGAAGATGAAAATCATGAGAATCTTGCTCCCAATGTAGAGGAGGGTTTGGTTTCACTGTTTAGGATTGGACTTACTTGTTCAATGGAATTCTTGCTCCCAATGTAG 2340 0.359 MSLKNLTTLTCACEQFVWYDSFFFNNLSSLMGLVTTKNNIHGSLPPNLFHTLPKLEHFLIGGNQISGTIPTSIINVSSFVEFDISQNQFVGQVPTLGKQKDLQLLNLEINNLGDNLTNDLEFLKSLTNCSKLYVISISFNNFGGILPNAIGNLSIELNELYVGFNMISGKIPAELGHLIGLTLLGLQFNYFEGIIPTSFGKLQKMQQLKLGGNKLLGNIPPFIGNLSQLYYLDLHHNMFDGNIPLSIGNCQQLQHLDFAQNQLRGTIPLEVFKLSSLSNMLNLSHNFLSRSLPREVGMLKNIGVLDVSENHLSGDIPTTIGECISLEHLLLQANFFNGTIPYTLASLKGLQYLDLSRNRLSGSIPDVMQNISLLEHLNVSFNMLEGQVPIDGVFGNATQVAIIRNNKLCGGILQLHLPPCSIKGRKQAKHHKFKLIAVIVSAVSSLLVLLFVITIYWMRKRNQNRSFDSPTIDQLAKVSYQDLHRGTNGFSTENLIGSGGFGSVYKGNLVSEDNVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNLVKILTCCVSTDYKGQEFNRDQKLMYFLPSNLVTNHPEILNVEHPTTLNLGHRLNIIIDVASALQYLHQDCDQVVIHSDLKPSNVLLDDDMVAHVSDFGIARLVSAIGGTSHKNTSTIGIKGTVGYTPPEYGMDSEVSTLGDMYSFGIFLLEVLTGRRPIDEAFENGQNLHNFVAVSFPDNVLKFLDPHLVFRDGEVEIEDENHENLAPNVEEGLVSLFRIGLTCSMEFLLPM* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2693 779 Pfam Protein kinase domain 491 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2693 779 Gene3D Ribonuclease Inhibitor 115 429 IPR032675 -
Psa1g2693 779 SUPERFAMILY L domain-like 157 410 - -
Psa1g2693 779 Gene3D Phosphorylase Kinase; domain 1 453 561 - -
Psa1g2693 779 Gene3D Transferase(Phosphotransferase) domain 1 583 774 - -
Psa1g2693 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Psa1g2693 779 ProSitePatterns Protein kinases ATP-binding region signature. 496 519 IPR017441 GO:0005524
Psa1g2693 779 ProSiteProfiles Protein kinase domain profile. 490 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2693 779 Pfam Leucine rich repeat 325 384 IPR001611 GO:0005515
Psa1g2693 779 Pfam Leucine rich repeat 180 238 IPR001611 GO:0005515
Psa1g2693 779 PANTHER LRR RECEPTOR-LIKE KINASE 2 774 - -
Psa1g2693 779 SMART serkin_6 490 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2693 779 SUPERFAMILY Protein kinase-like (PK-like) 464 718 IPR011009 -
Psa1g2693 779 Gene3D Ribonuclease Inhibitor 1 99 IPR032675 -
Psa1g2693 779 SUPERFAMILY L domain-like 3 220 - -
Psa1g2693 779 PANTHER OS04G0122200 PROTEIN 2 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2693 Psa-Chr1 232109546 232112003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2693 26 774 Receptor kinase-like Gene Family AT3G47570 46.084 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa1g2693 Pkinase 2.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2693 - - mtr:MTR_5g025930 968.378