Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2686 ATGAGAGAAACCATATCAGAAACATGGTTGGTTATGATCATTGTGATATTGGTGACTGCATTATTTGCAAGACTAATTCAAATCAAGAAAAGGAAAGGAGAGAAGAGTTTATGCAGATTACCGCCCGGAAGGAGAGGCTGGCCTTTGATTGGTGACAGTATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCGGTTCGTTGAAGAAATGGCGCAAAGGTATGGTAAGATATTTTCTTGCAGCCTATTTGGAAAATGGGCAGTGGTGTCGTTGGAGCCGAGTTTCAACCGTTTTGTAATGCAAAACGAAGGGAAGTTATTCATTTCGAGTTATCCAAAATCTTTTAGAGATTTGGTTGGTAAAAATGGTGTGATAACAGTTCAAGGAGATCAACAAAGGAAGCTACATGGGATTGCGTCAAATATGATGCGCCTAGATAAGCTTAAGTTCCATTTCATGAATGATATACAAAATGTTATGATCCAAACTTTGAGCAATTTTGACAACAATCAAGTCATTCTTCTCCAAGATGTTTGCAGAAAGGTAGCTATAAACTTAATGGTTAATCAACTATTAGGAGTTTCGAGTGAGTCTCAAGTCAATGAAATGGCTCAATTGTTTTCTGATTTTGTTGATGGTTGTTTATCCATTCCAATCAACATTCCAGGCTCTTCATATCACACTGCTATGAAGGCAAGGGAGAAAATCATAAGCAAGATAAACAAGATCATAGAGACTTACAGAAAAAACGGTGCGGCAAAAGAAGGTACTAATAATGGTGTACTTGGAAGGTTACTAGAGGAAGATAGCTTGCCAGATGAGGCTGTTGCAGACTTCATCATCAATCTTCTCTTTGCCGGCAATGAAACAACCACAAAAACAATGCTTTTTGCAGTCTATTTCCTTACTCAATCTCCTAATGCCATGAAGGAACTTCTGGATGAACAAGATTCTCTAAGGACTAATTCTAGAGAAGAATTTCTTACATGGCAGGACTATAAAGCAATGCCGTTTACTCAATGTGTTATTGACGAAACGCTTCGACTTGGAGGCATTGCAATTTGGTTAATGAGAGAAGCAAAAGAGGACATTCAATACCAAGATTTTGTTATTCCAAAAGGATGCTTTGTGGTTCCATTTCTTTCGGCGGTTCATTTAGACGAAAAGGTATACGACGGAGCTACAAACTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAAGAAAAGAGAAACTGGAGAACTAGTCCAGTTTTTGCACCCTTTGGAGGAGGTGCTAGATTTTGTCCAGGAGCCGAGTTAGCTCGTCTTCAAATCGCTCTTTTTCTTCATTACTTCGTAACACACTACAGATGGAAACAAATGAAGGAAGATAGAATGTCCTTCTTTCCGTCAGCTCGGTTAGTGAATGGCTTTGAAATTTGTTTAACAAGAAGACATGATGATAATCAAAGAAACTGA 1467 0.3865 MRETISETWLVMIIVILVTALFARLIQIKKRKGEKSLCRLPPGRRGWPLIGDSINWYNAVASSHPPRFVEEMAQRYGKIFSCSLFGKWAVVSLEPSFNRFVMQNEGKLFISSYPKSFRDLVGKNGVITVQGDQQRKLHGIASNMMRLDKLKFHFMNDIQNVMIQTLSNFDNNQVILLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINIPGSSYHTAMKAREKIISKINKIIETYRKNGAAKEGTNNGVLGRLLEEDSLPDEAVADFIINLLFAGNETTTKTMLFAVYFLTQSPNAMKELLDEQDSLRTNSREEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDIQYQDFVIPKGCFVVPFLSAVHLDEKVYDGATNFNPWRWMEPENEEKRNWRTSPVFAPFGGGARFCPGAELARLQIALFLHYFVTHYRWKQMKEDRMSFFPSARLVNGFEICLTRRHDDNQRN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2686 488 SUPERFAMILY Cytochrome P450 38 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Psa1g2686 488 Gene3D Cytochrome P450 29 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 Pfam Cytochrome P450 41 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PANTHER CYTOCHROME P450 SUPERFAMILY PROTEIN 3 479 - -
Psa1g2686 488 PRINTS E-class P450 group IV signature 67 90 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PRINTS E-class P450 group IV signature 279 305 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PRINTS E-class P450 group IV signature 338 354 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PRINTS E-class P450 group IV signature 415 431 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PANTHER CYTOCHROME P450 26 3 479 - -
Psa1g2686 488 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2686 488 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2686 Psa-Chr1 231480895 231483335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2686 6 484 Cytochrome P450 AT1G73340 70.146 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2686 - - gmx:100806921 855.514