Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2591 ATGTTATGTGTTCCTAACTCAAGTCCACTTGCAAACCGTTTAGGATTTGAGGTTCCTGTGACATCGTCAGACGAAGTCACCGAGAAGATGGAAAAAGAAGAAAATATAAACCATGGTGATGATGTGCTTGATATAGAAAACGAAGGTAGCTTTGATGGCAACGGCGAAGAAATTGGAAGATATTGGTCACAGTTTTCTGAAAGGAACATGACATATGAAGAACCTCTTCTTGTGAAGAGGATTAATACTACCTCTCAGATTGCCATAGTTGGTTCCAACCTTTGCCCTATCGAAAGTCTCGATTATGAGATTTTTGATAGTGAAACATTTAACCAGGACTGGAGGTCCAGGAAGAAGGTTCAGATATTCCAATACGTCTTACTTAAATGGGTATTTGCTCTTCTTATTGGATTAGGAACCGGATTGGTTGGTCTTTTCAACAACGTTGCTGTCGAGAACATAGCCGGTTTCAAGCTTCTTCTTACAACTAATCTCATGTCTAAACATAGATATTTTGAGGCGTTTCTAGTATATGCCGGTTTGAATATGAGTTTAGCAGCAGCGGCTGCAGCTCTCTGTGCTTTCATTGCTCCGTCGGCAGCAGGCTCTGGCATTCCGGAGGTTAAAGCGTATCTCAACGGCATCGATGCTCACTCGATTCTGGCTCCATCCACTCTTTTTGTAAAGATTGTCGGTTCCATCTTCGGAGTATCGGCTGGATTTGTGGTGGGAAAAGAAGGACCTATGGTTCATACAGGAGCATGCATAGCTTCTATTTTGGGGCAGGGAGGATCTCGAAAGTACGGTTTGAGTTGGAGTTGGCTAAGGTATTTCAAAAATGACCGAGACCGGCGAGACATGATTACTTGTGGTGCAGCTGCTGGTGTTGCCGCCGCCTTTCGATCTCCGGTAGGTGGTGTACTCTTTGCCCTTGAAGAGGCAGCTTCTTGGTGGAGGAGTGCTCTTCTATGGAGGTCATTTTTTACTACAGCAGTAGTTGCTATTGTTTTACGAGGCGGAATTCAATTTTGTTCGACCGGGAAATGTGGACTATTTGGCGAAGGCGGTCTTATATTGTATGATGTCAGTTCAGCAAAAGTAACATATAATGGTGGTGACATTTTAGCAGTTATAGTCTTGGCGACTATTGCTGGTATTCTTGGAAGCATTTATAATTTCCTCGTCGACAAGGTCGTACGTTCATATAGCATCATCAACGAAAAGGGTCCATTTTTCAAAATCGGTCTTGCAATTACAGTTTCTCTTTTGACATCATGTTGTTATTATTTCCTACCATGGATTGCAAACTGTCTCCCCTGTCCTACCGAAGGGGCGTTGACCTGTCCCTCGATTGACGAGTCGGGAGAATACAAAATCTTCCAATGTCCACCGGGCTACTACAACGATCTCGCTTCCCTCTTTCTAAACACCAATGATGATGCTATTCGTAATCTATTCAGTCCTAAGATAAACAAAGAGTTTCACATTTCAAGTTTGTTTATCTTCTTTGCAGCTGTTTACTTTCTTGGTATAATCACCTACGGTATCGCTGTCCCGTCTGGACTTTTCATTCCTGTGATACTTGCTGGTGCTGCGTACGGCCGTGTTATCAGTAGACTCTTCGAACCAATCACCAAACTCGACCGAGGACTCTTTTCTCTCTTAGGAGCCGCCTCTTTCCTCGGTGGCACAATGAGAATGACGGTATCGATTTGTGTTATATTACTCGAACTCACTAATGATCTCTTGTTACTTCCACTTGTGATGTTGGCATTATTAATCTCGAAATCAGTGGCCGACATTTTCAACAAAGGTGTCTATGATCAAATATTGAAGATCAAAGGACTTCCTTATTTGGAAGCGCACGCCGAACCATACATGAGGAATATAGCTACACGTGATGTTGTCTCGGGTCCGTTAATGTCCTTTTCGGGCATCGAAACGGTCGGGAACATTTTACATGTTTTGAATACTACAGGACACAACGGGTTTCCGGTCATCGACGAACCGCCTTTCACGGACTCACGAGAGTTGTGTGGACTCGTACTGAGGTCTTACTTACTAGTCTTACTAAAGGCGAAGAATTTTACAAGAGAGAGGGTTTTCGCAAATGCGAGTATCTTAGAAAATATTTCCGTGTTGGATTTTGGAAAGGCGGGGTCAGGAAAAGGGGTCAAATTAGAAGATTTAGATATCAAAGAGGAAGATTTGGATATGTATGTTGATCTTCATCCGATAACCAATACATCGCCGTACACCGTGGTTGAGACGATGTCACTTGCTAAAGCCGCTATTATTTTCCGTCAACAGGGACTCAGACACATGTGTGTTGTTCCGAAGAGCCAAGAGAGACCTCCAATCGTCGGGATTCTGACGCGCCACGATTTCATGCCGGAACATGTTTTGGGACTTTACCCCGATATCAAGCATCGCAAATGGCACTGA 2445 0.4356 MLCVPNSSPLANRLGFEVPVTSSDEVTEKMEKEENINHGDDVLDIENEGSFDGNGEEIGRYWSQFSERNMTYEEPLLVKRINTTSQIAIVGSNLCPIESLDYEIFDSETFNQDWRSRKKVQIFQYVLLKWVFALLIGLGTGLVGLFNNVAVENIAGFKLLLTTNLMSKHRYFEAFLVYAGLNMSLAAAAAALCAFIAPSAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIVGSIFGVSAGFVVGKEGPMVHTGACIASILGQGGSRKYGLSWSWLRYFKNDRDRRDMITCGAAAGVAAAFRSPVGGVLFALEEAASWWRSALLWRSFFTTAVVAIVLRGGIQFCSTGKCGLFGEGGLILYDVSSAKVTYNGGDILAVIVLATIAGILGSIYNFLVDKVVRSYSIINEKGPFFKIGLAITVSLLTSCCYYFLPWIANCLPCPTEGALTCPSIDESGEYKIFQCPPGYYNDLASLFLNTNDDAIRNLFSPKINKEFHISSLFIFFAAVYFLGIITYGIAVPSGLFIPVILAGAAYGRVISRLFEPITKLDRGLFSLLGAASFLGGTMRMTVSICVILLELTNDLLLLPLVMLALLISKSVADIFNKGVYDQILKIKGLPYLEAHAEPYMRNIATRDVVSGPLMSFSGIETVGNILHVLNTTGHNGFPVIDEPPFTDSRELCGLVLRSYLLVLLKAKNFTRERVFANASILENISVLDFGKAGSGKGVKLEDLDIKEEDLDMYVDLHPITNTSPYTVVETMSLAKAAIIFRQQGLRHMCVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRKWH* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2591 814 ProSiteProfiles CBS domain profile. 746 808 IPR000644 -
Psa1g2591 814 PRINTS Plant CLC chloride channel signature 314 322 IPR002251 GO:0005247|GO:0006821|GO:0016020
Psa1g2591 814 PRINTS Plant CLC chloride channel signature 328 338 IPR002251 GO:0005247|GO:0006821|GO:0016020
Psa1g2591 814 PRINTS Plant CLC chloride channel signature 346 353 IPR002251 GO:0005247|GO:0006821|GO:0016020
Psa1g2591 814 PRINTS Plant CLC chloride channel signature 470 486 IPR002251 GO:0005247|GO:0006821|GO:0016020
Psa1g2591 814 SUPERFAMILY CBS-domain pair 623 797 IPR046342 -
Psa1g2591 814 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 63 811 - -
Psa1g2591 814 Pfam Voltage gated chloride channel 186 600 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa1g2591 814 Pfam CBS domain 748 796 IPR000644 -
Psa1g2591 814 CDD ClC_6_like 98 619 - -
Psa1g2591 814 Gene3D - 620 798 IPR046342 -
Psa1g2591 814 PRINTS Chloride channel signature 198 215 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa1g2591 814 PRINTS Chloride channel signature 229 248 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa1g2591 814 PRINTS Chloride channel signature 293 312 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa1g2591 814 PRINTS Chloride channel signature 518 538 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa1g2591 814 PRINTS Chloride channel signature 550 566 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa1g2591 814 PRINTS Chloride channel signature 568 587 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa1g2591 814 PRINTS Chloride channel signature 606 620 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa1g2591 814 Gene3D Clc chloride channel 121 619 - -
Psa1g2591 814 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 63 811 - -
Psa1g2591 814 CDD CBS_pair_voltage-gated_CLC_euk_bac 633 799 - -
Psa1g2591 814 SUPERFAMILY Clc chloride channel 110 622 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2591 Psa-Chr1 221678052 221682761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2591 37 812 Ion Channels AT5G49890 69.782 0.0 1081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2591 K05016 - gmx:100809070 1225.31