Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2560 ATGTCGTCTCCAAACAAACCCAAGCTCGTTCTTCCTTGGAAGACTCGCCTCTCAATTTCATTCCTAACGGCTTTAACGGACGCCGCATGTCGATCTGACGGAACCATTAACCGCCGTTTTCTCAGCGTCCTAGATCGTAAAGCTACCGCTAAAGCCACTCCTATTAACGGCGTTTCAACCAAAGACGTTACGGTTAGCGACGAACATAACGTTTGGTTCCGTCTCTACACACCCGCCGGAGATGAAACTGACACCATAACCGCCTCCCTTCCGGTGATAATTTTCTTTCACGGTGGTGGATTTAGCTATCTCTCCCCAGCTTCAATCGCCTATGACGCCGTTTGCCGTAGATTCTGCCGTAAAATCTCCGCTGTTGTTGTCTCCGTCAACTACCGTCTAACGCCGGAGAATCCTTACCCGTCGCAATACGACGATGGAGAATCCGTGTTAAAATTCCTCGACGAGAACAAATCTGTGCTACCGGAAAATGCTGACGTGTCAAAATGTTTCTTAGCCGGGGATAGTGCCGGTGCAAATCTAGCACACCACGTGGCGGTCCGGGTCTGCAAAGCGGGGCTCCAGAGGATCCGGGTCGTCGGATTGATTTCGATCCAACCGTTCTTCGGCGGAGAGGAGCGGACAGAAGCCGAGATTCGCCTCGAGGGATCGCCGTTGGTGTCGATGGCGAGGACAGATTGGCTGTGGAATGTGTTTTTGCCAGAGGGATCGAATCGGGATCATGGCGCGGTGAATGTTTGCGGGCCGAATGCGGAGGATTTGTCGGGTTTGGATTACCCGGATACGGTTGTTTTTGTGGGCGGGTTTGACCCGTTAAATGATTGGCAAAGGAGGTATTGTGATTGGTTGAGGAAATCAGGGAAAAATGCTGAGTTGATTGAATATCCTAATATGATTCATGCTTTTTATATTTTTCCTGATTTGCCTGAAGCTACTCAGTTGATTATGCAAGTTAAGAGAGGTATTGTGATTGGTTGA 996 0.496 MSSPNKPKLVLPWKTRLSISFLTALTDAACRSDGTINRRFLSVLDRKATAKATPINGVSTKDVTVSDEHNVWFRLYTPAGDETDTITASLPVIIFFHGGGFSYLSPASIAYDAVCRRFCRKISAVVVSVNYRLTPENPYPSQYDDGESVLKFLDENKSVLPENADVSKCFLAGDSAGANLAHHVAVRVCKAGLQRIRVVGLISIQPFFGGEERTEAEIRLEGSPLVSMARTDWLWNVFLPEGSNRDHGAVNVCGPNAEDLSGLDYPDTVVFVGGFDPLNDWQRRYCDWLRKSGKNAELIEYPNMIHAFYIFPDLPEATQLIMQVKRGIVIG* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2560 331 PANTHER CARBOXYLESTERASE 18-RELATED 4 323 - -
Psa1g2560 331 Pfam alpha/beta hydrolase fold 93 309 IPR013094 GO:0016787
Psa1g2560 331 SUPERFAMILY alpha/beta-Hydrolases 27 321 IPR029058 -
Psa1g2560 331 PANTHER ARYLACETAMIDE DEACETYLASE 4 323 - -
Psa1g2560 331 Gene3D alpha/beta hydrolase 2 329 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2560 Psa-Chr1 217831404 217857563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2560 6 313 Carbohydrate Esterase AT3G05120 39.185 1.56e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2560 - - gmx:100799285 490.345