Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2532 ATGGAGTGCAACAAGGATGAGGCCACCAGAGCTAAAGAAATTGCTGAGCGGAAGTTTATTGAAAAGGACACTTCGGGTGCGAAGAAGTTTGCTTTGAAAGCCCAAAATTTGTTTCCTTCCCTTGAAGGTATTCCTCAAATGATAGCAACACTTGACATATATATATCAGCCGATAATAAAGTAAAAGGAGAAGCAGATTGGTATGGTATACTTGGTGTGAGCCCCCATGCTGATGATGATACAGTTCGGAAACATTATAGAAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAATCCATCGGAGCTGACGGGGCCTTTAAACTTATTTCGGAGGCGTGGAGTATATTGTCCGACAAGGCTAGAAGGGCAGCTTATGATGAGAAGATAAATGCAAGAGCACAGAAAGGCTCAGCCATTTTCGGTGGTTCGTCAGCAAAAGCGGCGGCAAATGGGGCTAACAATAGTAAAAAGAAAACCCCTTCAAGTGGAAAGACTCAGAAGAATACTGCTAAAGAAAATACATCGTCTTCCAATAAATCAAAATCCACATTTTGGACTACTTGCAAACGCTGTAAAATGCAATACGAATATCTCAGAGTTTATCTTAACCTTAAACTCGTGTGTCCCAGCTGCCATGAAGCATTTTTGGCTGTAGAAACTGATCCGCCTCCTGCAAGTGGTATCAGACCTGGAACGTCGTGGATTTTTAAACAAAAGTACGATAACGAAGGACCTAATAATAGCAAATCTGTGGTTGGAAAGAACAACACGGCACCTCCAAATACTGGAGCAGGGTCTAACAAGAACAGCTTCCAGTGGGCTCCATTCTCTAAAACTTCTGGTGTTTCTGATGTGGCTCAAGCGGCAAATGTAGTTCAGCAGGCATATGATAAGGTGAGGCGAGATCGTGAGGAGGCACAAGCAGCTACCAAAAAGGAAGAGGCTTTGAAAAGGAAGCAGAATGCTTCGAAAAAAGGTTACTTTAATCCAGCTAAGAGGAAAAGAAAGGGCATGGATGGAAATGGGGCAGTTGGAGCATCTAACTTAGGCAGTGGAATCAAGTTCAACTGTACTAGATATCTCTCCCCAGTTGAACTTCAGAGTCTTCTTGTTGAGAAAGCTAGAAAAGAAATTAGTAAGAAACTGTTTCAGTCAAATACTGTTGATGAATCAGCAGCAAAAAAGAGTGGAGATTGCTTCCAGAAAGCAAACCGGAAAGTAGAATTTTCAGCAAGAAACTCTGAGATCTGCACTCAAAATAACACTGGGAAGTCAGAAGATGCGAAGAGTAGTCTGCAGGAGAGCAGGTCATTTGCTGCTCCTATCATTGATAACACTTGCCCTGAAATTTTGGATTCATTGCTAGTAGATATTCCAGATCCTGATTTTTATGATTTTTACAAGGATCGAACTGAAAGGTCTTTTGGTGAAAATCAAGTATGGGCTGCATATGATGGTGATGATGGGATGCCTCGAAATTATGCTATGATTCACAGAGTGATCTCGATGAATCCATTCAATTTGCAGATCAGTTGGCTGTACCCAAATATCAACGGCGGCGAACCAGGCCCTCTAAATTGGGTTTCTTTTGGCTTTTCAAAAACTTGTGGGCATTTCAGATTAGGCAAACGCGAAATCTATAACTCAATCAATTGTTTTTCTCAGAAGGTTAGGTGGAAAAAAGGTAACGATGGGGCAATTTGTATAAATCCCAAAAAAGGGGAGGTTTGGGCCATCTATAGGAACTGGTCTCCTAGTTGGAATGATCTAATAGCAGATGATGTAATACACAAGTTTGACATGGTTGAAGTACTCGAAGATTTTGTTGAAGAACAGGGTGTAACGGTTATTCCTCTGGTCAAGGTGGCTGGGTTCAAGGCAGTATTTCACCACCACTTAAATGAGAAAGAGATCAAGATCATTCCAAGGAAGGAGATGCTTCGATTCTCTCATCAGGTACCTTCACATGTACTCACCGGCGAAGAAGCTCCTAATGCTCCAAAGGGTTGCAGGGTGCTGGACCCAGCTGCTACTCCATGTGAACTTCTCGAGGTAATAAAAGTTGCCGAAGAAAACATGACGGACAATGTGGATAGAGTTATAAAAGAAACTAATCATGAGGAAATGGTCGTTGATACGGGAAAACTTGGGGGAACAAAGGAGGGAATGAAGACAGTTATCCATAAAATAGAAACTCCAAAAGAGGACAGAGGGAAGAAGATATGCAGAGACTTGTAG 2241 0.4203 MECNKDEATRAKEIAERKFIEKDTSGAKKFALKAQNLFPSLEGIPQMIATLDIYISADNKVKGEADWYGILGVSPHADDDTVRKHYRKLALMLHPDKNKSIGADGAFKLISEAWSILSDKARRAAYDEKINARAQKGSAIFGGSSAKAAANGANNSKKKTPSSGKTQKNTAKENTSSSNKSKSTFWTTCKRCKMQYEYLRVYLNLKLVCPSCHEAFLAVETDPPPASGIRPGTSWIFKQKYDNEGPNNSKSVVGKNNTAPPNTGAGSNKNSFQWAPFSKTSGVSDVAQAANVVQQAYDKVRRDREEAQAATKKEEALKRKQNASKKGYFNPAKRKRKGMDGNGAVGASNLGSGIKFNCTRYLSPVELQSLLVEKARKEISKKLFQSNTVDESAAKKSGDCFQKANRKVEFSARNSEICTQNNTGKSEDAKSSLQESRSFAAPIIDNTCPEILDSLLVDIPDPDFYDFYKDRTERSFGENQVWAAYDGDDGMPRNYAMIHRVISMNPFNLQISWLYPNINGGEPGPLNWVSFGFSKTCGHFRLGKREIYNSINCFSQKVRWKKGNDGAICINPKKGEVWAIYRNWSPSWNDLIADDVIHKFDMVEVLEDFVEEQGVTVIPLVKVAGFKAVFHHHLNEKEIKIIPRKEMLRFSHQVPSHVLTGEEAPNAPKGCRVLDPAATPCELLEVIKVAEENMTDNVDRVIKETNHEEMVVDTGKLGGTKEGMKTVIHKIETPKEDRGKKICRDL* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2532 746 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Psa1g2532 746 SMART dnaj_3 65 122 IPR001623 -
Psa1g2532 746 MobiDBLite consensus disorder prediction 150 180 - -
Psa1g2532 746 Gene3D DnaJ domain 63 187 IPR036869 -
Psa1g2532 746 Coils Coil 290 320 - -
Psa1g2532 746 CDD DnaJ 66 119 IPR001623 -
Psa1g2532 746 SUPERFAMILY Chaperone J-domain 56 126 IPR036869 -
Psa1g2532 746 Pfam Domain of unknown function (DUF3444) 457 663 IPR024593 -
Psa1g2532 746 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Psa1g2532 746 PANTHER BNAC03G44070D PROTEIN 1 685 - -
Psa1g2532 746 PRINTS DnaJ domain signature 68 86 IPR001623 -
Psa1g2532 746 PRINTS DnaJ domain signature 86 101 IPR001623 -
Psa1g2532 746 PRINTS DnaJ domain signature 102 122 IPR001623 -
Psa1g2532 746 Pfam DnaJ domain 66 127 IPR001623 -
Psa1g2532 746 PANTHER BNAA04G14940D PROTEIN 1 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2532 Psa-Chr1 214741421 214747733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2532 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.047 1.19e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2532 - - lja:Lj2g3v0520120.1 954.51