Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2529 ATGGCTTCCATTGCTGCTTCAACTGCAGCTGCTTCACTTGGAATGTCAGAAATGCTTGGAACTCAAATTAAATTCAGTGGTGCAACAAGGTCTCTTCCTTCTTCTTCATCTGGTTCTAGCTTTAAAACTGTTGCTCTTTTTTCGAAGAAGAAGGCGGCTCCGGTGAAGCAGAAGGTGGTTGCTCCGGCCAACGAGGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCTGATGGTCTCTTGGACAGGTCCGAGATTCCCGAGTACTTGACCGGAGAAGTCCCCGGAGACTATGGTTATGATCCTTTTGGTCTAAGCAAGAAGCCTGAAGACTTTGCCAAATATCAGGGATATGAGTTGATTCATGCAAGATGGGCCATGCTCGGTGCTGCCGGATTCATCATTCCCGAGGCATTCAACAAATATGGAGCCAACTGTGGTCCCGAGGCTGTTTGGTTCAAGACCGGAGCACTTCTTCTTGACGGAGGCACGTTGAACTACTTCGGAAAACCAATCCCCATCAACCTTATTCTCGCTGTTGTTGCCGAGGTTGTTCTCTTGGGAGGTGCCGAGTACTACAGAATCACCAATGGACTGGACTTGGAAGACAAGTTTCATCCAGGCGGTCCATTCGATCCATTAGGTCTAGCAAATGATCCCGACCAAGCTGCAATCCTAAAAGTGAAGGAAATTAAGAATGGAAGACTTGCTATGTTTGCCATGCTTGGTTTCTTCATTCAAGCTTACGTCACAGGAGAAGGACCTGTCGAGAATTTCGCAAAACATCTCAGTGACCCTTTTGGCAACAATTTGCTCACTGTCATTGCTGGAAATGTTGAGAGGGCTCCAACTCTGTGA 867 0.4752 MASIAASTAAASLGMSEMLGTQIKFSGATRSLPSSSSGSSFKTVALFSKKKAAPVKQKVVAPANEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLILAVVAEVVLLGGAEYYRITNGLDLEDKFHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENFAKHLSDPFGNNLLTVIAGNVERAPTL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2529 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 288 IPR001344 GO:0009765|GO:0016020
Psa1g2529 288 Gene3D Chlorophyll a/b binding protein domain 77 288 - -
Psa1g2529 288 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 288 - -
Psa1g2529 288 Pfam Chlorophyll A-B binding protein 90 251 IPR022796 -
Psa1g2529 288 SUPERFAMILY Chlorophyll a-b binding protein 70 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2529 Psa-Chr1 214432403 214435099 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2529 11 288 Chloroplast and Mitochondria Gene Families AT4G10340 83.871 7.32e-154 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2529 K08916 - gmx:100806585 479.174