Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2516 ATGGGTAAGGAATGGAATTGGGTTGGAAAATCATCCAAAAGAAGTGTTATAGTCGAAGAAAACCATGAAACAAAAACAACAACTATGGGTTGCATGTGTGCTGTTTTTCAATTCTTTGATTTTCATCATTTTTCTAACTCAATAAACCATCAACAACAAATCACTTTCAAATCATCTTCTTCTACTATACTCCCAAAAGTTTCAGGTGGTGAAGCTCCTAGGAATAGCTTGGAATCTGAGGATAGCATTATTTCAGCTTCTCTATCAAAAGAAGAAAATTTTAAAATTCCAAATATACAAATCAAAACAAAAAGGAGCAATGGTGGAATATTGACTGATTTGTCCTCAGAAATCAGCACTTCATCCACACCAGGAACAAAGACACCAACTTTGGTAGCAAGATTAATGGGTTTAGATATTCTTCCAAATTCAAATTCACCCTCTTTTTCTTCACCTCTTTCAACATTAAATTCACAAGGCAAGAACAATATTATTCAACATCTTCACCAAATTAGAACCAAACCAAGGAATAGTATTGATAGTAGTGAAATTACAAGAATGCCCTCATCAAGAAAATCAGATTTTGATCAACATAGGCTCTCTCTTCAAATCAACAAAGAGGATGGTCTTGGGGATGAGGATTTTGAGCTGCCTAGATTGTCATTTTCAAAGAGGAAAGTTGATGAGAATAGTTCTAAAAGTTCAAGTCACTATGCTAAGCAAATTGTTAAACAAGTTAAGGAAAGTGTGGTGAGTAGAAAAGTTGGTCAAGACATTACCAACAATCTCACAAGCATTCAGGATGTCAATATCAAACAAAACACTAGAGTCACCAAGAAGTTACCAAGCAATGATCAATTACAAGCAAGAGAAGAATTGCCAGGACAATCAAGAGTCAAGAAATGTCCTAAAACAACATTGAAAGATTCAAACCCTAATTCATCAAATTCACCAAGGACTAGATTCATTGACAACAAGCACAAGCCAAACACAACAACAAAAACAACATCAAAAGGTCAAAACACAAAACTAAAGGTTTATGCATTGAAACAAGAGCAAGAATCAAAGGACAAGAAGCTAGTCTCATCAAATTGTAAGAAAGCTACAAATGAAAAGTTTAGTTCTAGACTCAAAAGGCCTCCACAAACATCGGATATAATCGTTCGACCGACATCGAATTCTCGAGCAAATGACATCAAAAGTAATACCAAATGCAAGAAAATTCAGCCATTGTCAAACAATCTCATCAACAACATCAATGCTGTTTCAAATGTTGATTCTGTTAAGACAGAGTCTTCTCCTCTGTCCAACAAAATTCCTTGGAAACAGTCACAGGAATCTGAACCTCAAGACTCCAAACTTCAAAGGTACAAACCAGAATTTCAGTACATTGCAGAAATCTTAAACAAACATGTCACAACAACAAAAACAATGTCTTTTAAAAGACTGTTCTCTTCAACACACTCACTTGACCCATCAATCTTCAACTTTCTCGAACAAAATTCCGACGATAAAGATCAAAACTTTGCCACAAAAAACCAAATGGGTCAACGTTGGAATCGTAAATTGATCTTTGATTTGGTGGATGAAGTTCTAATGGAGATTTTGAAACCAAAGAGTAGTGAAAAAAAACTATGTTTTTTAGATGGATTTTGTGACAAGTGGACAGTTATGGAGTTAACAGAGAAAGTTTGGAAAAGGGTTAGGGAATTTCCTTGTGCAAAGTGTGAAGTTCTGGATGATATTGATTATTTGATTGAATCAGAAGATATGGAGAAAGTTATCAAGGTTGAAGGTGAAGATGAAAGAAAAGGCTTGGTGAGAGAGATTGAACGGAACATATTGAACACATTGGTGCATGAAACTATTTTGGTTATGAGTATATGA 1887 0.3487 MGKEWNWVGKSSKRSVIVEENHETKTTTMGCMCAVFQFFDFHHFSNSINHQQQITFKSSSSTILPKVSGGEAPRNSLESEDSIISASLSKEENFKIPNIQIKTKRSNGGILTDLSSEISTSSTPGTKTPTLVARLMGLDILPNSNSPSFSSPLSTLNSQGKNNIIQHLHQIRTKPRNSIDSSEITRMPSSRKSDFDQHRLSLQINKEDGLGDEDFELPRLSFSKRKVDENSSKSSSHYAKQIVKQVKESVVSRKVGQDITNNLTSIQDVNIKQNTRVTKKLPSNDQLQAREELPGQSRVKKCPKTTLKDSNPNSSNSPRTRFIDNKHKPNTTTKTTSKGQNTKLKVYALKQEQESKDKKLVSSNCKKATNEKFSSRLKRPPQTSDIIVRPTSNSRANDIKSNTKCKKIQPLSNNLINNINAVSNVDSVKTESSPLSNKIPWKQSQESEPQDSKLQRYKPEFQYIAEILNKHVTTTKTMSFKRLFSSTHSLDPSIFNFLEQNSDDKDQNFATKNQMGQRWNRKLIFDLVDEVLMEILKPKSSEKKLCFLDGFCDKWTVMELTEKVWKRVREFPCAKCEVLDDIDYLIESEDMEKVIKVEGEDERKGLVREIERNILNTLVHETILVMSI* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2516 628 MobiDBLite consensus disorder prediction 432 453 - -
Psa1g2516 628 MobiDBLite consensus disorder prediction 306 320 - -
Psa1g2516 628 MobiDBLite consensus disorder prediction 432 448 - -
Psa1g2516 628 MobiDBLite consensus disorder prediction 174 196 - -
Psa1g2516 628 MobiDBLite consensus disorder prediction 277 341 - -
Psa1g2516 628 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 627 - -
Psa1g2516 628 Pfam DUF761-associated sequence motif 122 146 IPR032795 -
Psa1g2516 628 Pfam Domain of unknown function (DUF4378) 460 621 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2516 Psa-Chr1 211984959 211988804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2516 98 622 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 30.102 2.60e-38 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2516 - - mtr:MTR_6g089530 737.258