Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2496 ATGTCTGAAACACCACCACTGTCTCAAACCATTGATCCCTACAAACATCTTCATCTTCTCCGCAACCCCGACAGCACAATCACACGCTTACTCCAACTTCCACACACCTCACCTTCATCAGATACAACATTTCCAATCACTGTCCTCACCAAAGACATCACAACAAATCAAACAAACAAAACATGGGTTCGATTATTCCTACCCAACAAACCACTTCCCAACAACCAAAAACTACCTCTCATTGTTTTCTTTCATGGAAGTGGGTTTATCTTAGCCAGTGTTGGTTCAACTATGTTTCATGATTTCTGTGTGAATATGGTTGATGAGATTGGAGTTTTTGTTGTCTCTGTCGGGTACCGTCTTGCGCCGGAGCACCGTTTGCCGGCGGCGTATGATGATGCTATGGAAGCTTTGTTTTGGATAAAAAGTATGGAAGATGAATGGTTGAGACGTTATGTTGATTATTCTAAATGTTATCTCATGGGAAAAAGTGCTGGAGCTACCATTGCTTACCACGCAGGTCTAAGAGCAGTAGAGGTTGTGAATGAACTTGAGCCAATTAAAATCCAAGGGTTAATATTGCGCCAACCATTTTTTGGTGGAAAAGAGAGAACCGAATCCGAGTTAAGGCTTGTGAATGATCGAATTGTTCCATTGTGTGTTACTGATTTAATGTGGGAATTGGCACTTCCAATTGGAGCTGACCGCGATCATGAGTATTGCAATCTAAGGGTTGGGAATGGTCTTGAGAAGTTGGAGAAGATAAGGGACGTTGGATGGAAGGTATTGGTGAGTGGGAATGATGGAGATCCAATGGTGGATCGTGAGAAAGAGTTGGCACAGTTGATGGAGGAAAATGGTGTTCATGTTGTGAAGGACTTTGAAGAAGGTTCTCATGCAATAGAGTATTCTGATCCATTGAAATCTAAGAAATTGATTGAGTTAATTAAGGGCTTTATTTCATAA 966 0.4151 MSETPPLSQTIDPYKHLHLLRNPDSTITRLLQLPHTSPSSDTTFPITVLTKDITTNQTNKTWVRLFLPNKPLPNNQKLPLIVFFHGSGFILASVGSTMFHDFCVNMVDEIGVFVVSVGYRLAPEHRLPAAYDDAMEALFWIKSMEDEWLRRYVDYSKCYLMGKSAGATIAYHAGLRAVEVVNELEPIKIQGLILRQPFFGGKERTESELRLVNDRIVPLCVTDLMWELALPIGADRDHEYCNLRVGNGLEKLEKIRDVGWKVLVSGNDGDPMVDREKELAQLMEENGVHVVKDFEEGSHAIEYSDPLKSKKLIELIKGFIS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2496 321 PANTHER ARYLACETAMIDE DEACETYLASE 7 320 - -
Psa1g2496 321 Pfam alpha/beta hydrolase fold 81 300 IPR013094 GO:0016787
Psa1g2496 321 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 7 320 - -
Psa1g2496 321 SUPERFAMILY alpha/beta-Hydrolases 24 301 IPR029058 -
Psa1g2496 321 Gene3D alpha/beta hydrolase 14 321 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2496 Psa-Chr1 210266071 210299659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2496 58 290 Carbohydrate Esterase AT5G16080 34.979 1.30e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2496 - - aprc:113866682 445.277