Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2473 ATGAAAAATCTCAAAACACTAATTATTAGACATGCCACTTTTTCTAAAAGTCCCAGCTATCTTCCAAATAGTGTAAGAGTATTGGAATGGTGTGAGTATCCTTCATCAGATTTACCACCTGGTTTTTATCCGGAGAAACTTGTTATATGCAATTTTGGCTCTAACTTTACATCAAATCCATTTGAGTGGGAGGACTTTCTCCAGAAGAAGTTCCAGAATATGAGAGTTTTAAATTTTGACCATTGTGAACTTTTAACAAAAATACCTGACCTATCTAGTCTCCCAAATTTAGAAGAATTTTCATTTCAAAATTGTGGGAATCTGATTGCAATTGATAAATCGATTGGTTTCCTGTACAAACTCAGAATCTTGAGAATTATGCATTGCAATGAAATCCAGAGTGTTCCACCTCCGAATTGGGCTTCACTAGTAGAACTCAATCTTTCACATTGTGATAGTTTAGAAAGCTTTCCTAGCGTCGTGGATGGATTTGTTGGCAAACTTGAAATCTTGAGGGTTATACGTTGCAGCAAAATCACAAGTATTCCACCTCTCATGCTAGCTTCTCTAGAAGAACTAGATCTTTCAAATTGTATCAGTCTTGAGAGTTTTCCACTTTTGGTAAAAGGGTTGCTCGCTAATCTTAAGACCTTGAGAGCTATGAATTGCATCAAGCTTAGGAGTATTCCAACTCTCAAGATGGCTTCTCTAGAAGAAATCGATCTTTCAAGATGTTCTTGTCTTGAGAGTTTTCCACCTGCGGTAGATGGGTTGGCGGATAAACTTAAAACTATGAGTGTTAGAAGTTGTGTCAAGCTAAGGAGTATTCCACCTCTCAAGTTGGATTCGCTAGAAAAACTTGATCTTTCACTAACAAGATCAGAACTCTCAAAAGGTGAACACGTGGACGGTTTTCTTGGCAAACTTAAAACCCTGCTTGTTCAAAGTTGTGACAGTCTCAGGAGTATTCCACCTCTCAAGTTAAATTCCTTAGAAGAACTTGACCTTTCACATTGTTATAATCTCGAGAGCTTTCCAATTGTGGTGGATGGATTGTTGGATAAACTTGAAGTCTTGAGTATTGAATATTGCATCATGCTTAGGAGTATCCCACCCTTGAGGTTGACTTCATTGCTAAAATTCAATCTTTCAGATTGTCTAAGTCTAGAGTGTTTTCCAGAAATATTAGGAGAGATGAGAAATATACCACAACTTTACTTGGGTAGCACTCCCATACAAAAACTTCCATTTCCATTTCGAAGTCTTACTCTGCGCCCAACATCATATCCATGTAACTGTAGAATTGTTAATTTACCAAATAGAGTTGCTGCGATGTCAATGTTGGCTAAACTTACCATCAAGGCTGAAAAAAAAGTGAGCCCCGTGCAATCTTCACAAGTAGAATATATTTGTCTCACGAAATGCAAACTTTCCGATGAATATTTGTCCATAGGTCTCGCGTTTTTTGCGAATGTGAAAGAATTACATTTAACTGAATGTCAATTCACAGTACTTCCTATATCTATTGAAAAATGTCACTTTTTATGGAGGCTTGTCTTGGATGATTGTGAGGAACTTGAGGAAATTAAAGGGATTCCACCTGGCTTAAAAGAATTATCTGCATTAAACTGCAAATCGTTGACTTTGTCGTGTAAAAGCAAATTATTAAATCAGGAATTGCATGAGTATGGAAACACTCGGTTCTGTTTGCCACGAGCAAAGATTCCAGAGTGGTTCGACCACCAATGCTCGGCAGGATTGTCAACTTCTTTCTGGTTTCGTAATAACTTTCCTGCCATAGTTCTCTGTGTTGTTTCTCCATTGACGTGGGTAGATGATTTTCGACGCTGTGTAAGAGTGACCATCAACGGAAATACATTTCTCTATACACGTGGTTTGAAGATACGTAGGTCACCGGCCAAAATGTATACTTTAAATCTTTTTCATATGCAAATGAAAAACTTCAATGATAATATGGACAAAGCAGTTTTAGAAAATAAGTGGAACCATGCAGAGGTTGATTTTGGATTCCCATTCATGAATAGTGGAATCCATGTATTGAAAGAGAAAAGTAGCATGAAGGATATACGATTCACCAACCCAGAGAATGATGCTAATATTGACTTCACTCGGAATGTTGAAGTGAGTATATAA 2154 0.3733 MKNLKTLIIRHATFSKSPSYLPNSVRVLEWCEYPSSDLPPGFYPEKLVICNFGSNFTSNPFEWEDFLQKKFQNMRVLNFDHCELLTKIPDLSSLPNLEEFSFQNCGNLIAIDKSIGFLYKLRILRIMHCNEIQSVPPPNWASLVELNLSHCDSLESFPSVVDGFVGKLEILRVIRCSKITSIPPLMLASLEELDLSNCISLESFPLLVKGLLANLKTLRAMNCIKLRSIPTLKMASLEEIDLSRCSCLESFPPAVDGLADKLKTMSVRSCVKLRSIPPLKLDSLEKLDLSLTRSELSKGEHVDGFLGKLKTLLVQSCDSLRSIPPLKLNSLEELDLSHCYNLESFPIVVDGLLDKLEVLSIEYCIMLRSIPPLRLTSLLKFNLSDCLSLECFPEILGEMRNIPQLYLGSTPIQKLPFPFRSLTLRPTSYPCNCRIVNLPNRVAAMSMLAKLTIKAEKKVSPVQSSQVEYICLTKCKLSDEYLSIGLAFFANVKELHLTECQFTVLPISIEKCHFLWRLVLDDCEELEEIKGIPPGLKELSALNCKSLTLSCKSKLLNQELHEYGNTRFCLPRAKIPEWFDHQCSAGLSTSFWFRNNFPAIVLCVVSPLTWVDDFRRCVRVTINGNTFLYTRGLKIRRSPAKMYTLNLFHMQMKNFNDNMDKAVLENKWNHAEVDFGFPFMNSGIHVLKEKSSMKDIRFTNPENDANIDFTRNVEVSI* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2473 717 Gene3D Ribonuclease Inhibitor 1 234 IPR032675 -
Psa1g2473 717 PANTHER ARCHAEAL ATPASE 260 676 - -
Psa1g2473 717 PANTHER ARCHAEAL ATPASE 1 161 - -
Psa1g2473 717 Gene3D Ribonuclease Inhibitor 235 400 IPR032675 -
Psa1g2473 717 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 260 676 IPR044974 GO:0006952
Psa1g2473 717 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 161 IPR044974 GO:0006952
Psa1g2473 717 SUPERFAMILY L domain-like 262 567 - -
Psa1g2473 717 SUPERFAMILY L domain-like 2 290 - -
Psa1g2473 717 Pfam C-JID domain 570 685 IPR045344 -
Psa1g2473 717 Gene3D Ribonuclease Inhibitor 401 565 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2473 Psa-Chr1 207397705 207400740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2473 306 455 WRKY Transcription Factor Family AT4G12020 33.987 1.27e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2473 - - mtr:MTR_6g079140 809.675