Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2470 ATGCGATTCGAGTGGATGGTAATTGAAGCAGCAACTAACAACTTTTCTAAAGATAATTTCATTGGCAAATGTGGATTTGGAGAGGTTTATAAGGGTACCCATCTGGATGGACGAGAAGTTGCTATAAAGAGACTTTCAATAAATTCTAAGCAAGATTCTCAATGCAAAAAGTTGTTAACTTGGGTTGAACGCTTCAATATCACTGGAGGAATTGTTCGAGGAATTCTTTATATGCATGAACATTCCCGACTCAAAGTCATACATCGCGATCTCAAACCAAGTAATATTCTATTAGGTGAAAACATGATTCCTAAAATTTCTGATTTTGGTTTGGCTCGAATTGTTGAAATAAGTCAAGATGAAGGAACTACAAATAGAATTGTTGGAACATAG 393 0.3537 MRFEWMVIEAATNNFSKDNFIGKCGFGEVYKGTHLDGREVAIKRLSINSKQDSQCKKLLTWVERFNITGGIVRGILYMHEHSRLKVIHRDLKPSNILLGENMIPKISDFGLARIVEISQDEGTTNRIVGT* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2470 130 Pfam Protein kinase domain 66 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2470 130 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 2 53 - -
Psa1g2470 130 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 53 130 - -
Psa1g2470 130 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2470 130 Gene3D Transferase(Phosphotransferase) domain 1 55 130 - -
Psa1g2470 130 Gene3D Transferase(Phosphotransferase) domain 1 3 54 - -
Psa1g2470 130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Psa1g2470 130 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 53 - -
Psa1g2470 130 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 53 130 - -
Psa1g2470 130 SUPERFAMILY Protein kinase-like (PK-like) 3 130 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2470 Psa-Chr1 207259337 207260266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2470 1 130 Receptor kinase-like Gene Family AT4G23280 53.846 2.25e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa1g2470 Pkinase 1.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2470 - - mtr:MTR_6g052970 207.994