Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2463 ATGTTACTGTTAACTGTTCTTGTGGGACTAGTGATGTTTCTAAGGATTATGGTTTGTTTATTACTTATCCTCTTAGAATTGAGATTTCTTTGGAATTTGATTTCGAAAAAGACTAAAGTTGATGCTGAGTTACTGCAGAAGTATAATCTTAGTGTGAATTTTAGTCAAGGGACTGGTTTGGTTTATATTCCTGGGAAAGACACAAATGGTAATTATGTGCCTCTTCACACAAACACTAAAGGTCTATCAGGTGGAACTATCATTGGAATATCTCTTGGAGAAGTAGCAGGACTAACGCTATTAAGATTTTGTATTTATATTACATGTTGCCGAAAGAAGAACGTATGGAATCAAGAATTTCTCTTTGAGGAAACCAGTGTGATCATTGAAGTCTCTAGTAATGCTGCATATAGAACTTCCGATTCTACGAGTCCTGCTAATATCATTGGCATTAGAGTGCAAAAATCAGGGGAGTTTTTGTATGAAGAACTAGCTAATGCTACTAATAACTTCTTCATTTTGGCTAACAAAATCGGTCAAGGAGGCACATTTGGTTACATGCCACCAGAAATTGCATATGGTAGTGTTTCATCCAAAACAGATGTATATGCGTTCGGAGTTGTTCTCTATGAACTAATTTCTGCTAAAGGAGCATCGAAGTCTCAATTAAACCAACAGAGTGGTGGATCAAACACTGGTGTTGTACCACAAGGACTTGAGAAGTTGCTTGTATCTCAATTAACGCAACAAACCCCTAAAATTTTGCCTAATCAAGTTGTAGCAGAAGCCGGTTCTCATGGTGATGTGGAAACCAATCATGCACAAGATTCAGTTGGTGCAAGGCCAGATATCCCTGTTGAAAGTAACGTTATTCAAGGAGTTAGCACAACGACTCCTTCGATAATTAATAATGGTAATAAAGCGGATATCAGATCTGCAGATATTTGA 948 0.3724 MLLLTVLVGLVMFLRIMVCLLLILLELRFLWNLISKKTKVDAELLQKYNLSVNFSQGTGLVYIPGKDTNGNYVPLHTNTKGLSGGTIIGISLGEVAGLTLLRFCIYITCCRKKNVWNQEFLFEETSVIIEVSSNAAYRTSDSTSPANIIGIRVQKSGEFLYEELANATNNFFILANKIGQGGTFGYMPPEIAYGSVSSKTDVYAFGVVLYELISAKGASKSQLNQQSGGSNTGVVPQGLEKLLVSQLTQQTPKILPNQVVAEAGSHGDVETNHAQDSVGARPDIPVESNVIQGVSTTTPSIINNGNKADIRSADI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2463 315 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 182 235 IPR044812 GO:0019199|GO:0045087
Psa1g2463 315 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 32 182 IPR044812 GO:0019199|GO:0045087
Psa1g2463 315 Gene3D Transferase(Phosphotransferase) domain 1 164 273 - -
Psa1g2463 315 PANTHER LYSM RECEPTOR KINASE 1B 32 182 - -
Psa1g2463 315 PANTHER LYSM RECEPTOR KINASE 1B 182 235 - -
Psa1g2463 315 Pfam Protein tyrosine and serine/threonine kinase 184 223 IPR001245 GO:0004672|GO:0006468
Psa1g2463 315 SUPERFAMILY Protein kinase-like (PK-like) 178 216 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2463 Psa-Chr1 206060849 206062007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2463 179 218 Receptor kinase-like Gene Family AT3G21630 80.000 3.36e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa1g2463 PK_Tyr_Ser-Thr 2.7e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2463 - K13429 mtr:MTR_5g086030 204.142