Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2450 ATGTTTACCCCTCTAGCTCTTGTACTTACAGCCATTTTCTCAGCAATTTGGTGGAAAGAAACACTCTTCTGGGGAAGTATTGGTGGCACTGTTTTGCTAGTTATTGGACTGTATAGTGTGTTGTGGGGGAAGAATAAAGAGTGTGTGAAACAAGTAGTACAAGAAAAAGCAGAGACTAGATTGGAGTGCGTTATACAGTCTGATGGATTTGACAAAGTTTAA 222 0.3964 MFTPLALVLTAIFSAIWWKETLFWGSIGGTVLLVIGLYSVLWGKNKECVKQVVQEKAETRLECVIQSDGFDKV* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2450 73 PANTHER WAT1-RELATED PROTEIN 1 52 - -
Psa1g2450 73 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 45 - -
Psa1g2450 73 PANTHER WAT1-RELATED PROTEIN 1 52 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2450 Psa-Chr1 203719679 203720984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2450 2 47 Nodulin-like Gene Family AT2G39510 50.000 2.35e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2450 - - gmx:100800562 98.2117