Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2443 ATGACATTGTGTGTGTACATTACATTATTTGTAGCCATTCTCTTCATCATGCTCTACATTAATATATGGAGAGGCAAGAAAAATGTGCCTCCAAATTGGCCAATAATTGGCATGTTACCATCAGTTTTTCATAACAAATCCAATATTCATGATTTTGTAACCTCAGGATTGAAATATTATGGAGGTACTTTGCATTTCAAAGGACCTTGGTTCACAAACATTGCCAACTTTATCCTCACCAGTGATCCTGTGAATGTGCACCACATCACTAGCAAGAATTTCAGCAACTATGGGAAAGGATCTGATTTCCATGAGATTTTTGAAATTCTTGGCGTTAGTATTATAAACTTGGATGGCAATGCATGGAAACAAGAGAGGGCACTACTTCATTCATTGCTCAGAAGCAAAAGTTTTGAGACATCCCTTCAACAAAACATTCACAAGAAGCTAGAGAATTGCCTACTACCATTTCTTGATCATCATGCATCTAAAGGTGCACAGGTACTTGATTTACAAAACATTCTTGAGAGGTTCACCTTTGATATTACTTGTACTTTTTTATTCGGATTTGATCCTAATTGTCTTCCTCACAAGTTCAATGATGAGTTGTTAGAAACTTCTTTTGTAAAAGCTATTTATATGCTTGAAGATATGGTGTTATCAAGACACTATATTCCAAAATGCTTTTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGAGAAGAAGAACAAAGCGGCTCAAGAAATTCTTCACCAATTCTTGTCCAAATGTATAGCTTATTCCAAAGGTGTTGATGAAAGTCATTCTTGCTTGCTAAAGCAACTCATGAAAGAAAAAAAGTTTGACAATGAAAAGTATATTAGAGACACTGCAGTGAGTCTCTTAGGTGCTGGAAATGGAACAATTAGTTCAGGTCTAAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCAGTCATTGAAACAAAAATCATTCAAGAAATTAAAGATTATTGTCTTGCAAATGATGATGATTTAATGACTAGTTTAAGTGCTGAAAAGCTTAATAAGCTAGTTTATCTTCATGGAGCTATTTGTGAAGCATTGAGGCTTTATCCACCTATACCATTTGAGCACAAATGTGCTAGAAAATCTGATATATTACCTAGTGGAGACTATGTTAGTCCAAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAGAAAATATGGGGGAATGATTGCTTGGAGTTCAAGCCAGAGAGGTGGATATCTAGTCGAGGAGGTGTTGTTTATGTACCGTCTTACAAGTTTATAGTGTTCAATGCAGGTCCAAGAAGTTGTTTGGGAAAAGATATTACCTTTGTTCAAATGAAAATGGTTGCAGCTGCTTTGTTATGGAAGTTTCATATAGAAGCTGTGGAAGGTCACACTATTGCTCCTAGGGTTTCTATGATTCTCCGCATGGAATATGGTTTTAAGGTCAAAGTTAGTAAAAGAAGTCTTTGA 1497 0.3554 MTLCVYITLFVAILFIMLYINIWRGKKNVPPNWPIIGMLPSVFHNKSNIHDFVTSGLKYYGGTLHFKGPWFTNIANFILTSDPVNVHHITSKNFSNYGKGSDFHEIFEILGVSIINLDGNAWKQERALLHSLLRSKSFETSLQQNIHKKLENCLLPFLDHHASKGAQVLDLQNILERFTFDITCTFLFGFDPNCLPHKFNDELLETSFVKAIYMLEDMVLSRHYIPKCFWKLQKWLQIGQEKKNKAAQEILHQFLSKCIAYSKGVDESHSCLLKQLMKEKKFDNEKYIRDTAVSLLGAGNGTISSGLSWFFWLVSTHPVIETKIIQEIKDYCLANDDDLMTSLSAEKLNKLVYLHGAICEALRLYPPIPFEHKCARKSDILPSGDYVSPNTKLIYSLYAMGRMEKIWGNDCLEFKPERWISSRGGVVYVPSYKFIVFNAGPRSCLGKDITFVQMKMVAAALLWKFHIEAVEGHTIAPRVSMILRMEYGFKVKVSKRSL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2443 498 Gene3D Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 SUPERFAMILY Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g2443 498 PANTHER CYTOCHROME P450 12 492 - -
Psa1g2443 498 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 492 - -
Psa1g2443 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Psa1g2443 498 Pfam Cytochrome P450 30 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2443 Psa-Chr1 202828258 202830224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2443 32 497 Cytochrome P450 AT2G23180 42.887 2.02e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2443 - - cam:101494575 637.491