Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2418 ATGCAAGTTGTTGTTGTCAGTGGAACCAACCCTTTCATTTCATCTCCTCTTTATGTCTCAACTGGTGCAAGTTCTTCACCCTTTGAAAATCAATTCGAAACAACAACCTTAAACACAACAAAAAGACCAAGATATAGTGGACAATGGAAGCTTCTACCATCACCACCATCACAACAACAACAAAAACAACCTCAAGCTCAAACTCAAATCAACATTCTTAATCCAACAACAGAATCAAAATCAACAACCCCTTCACCATCAAATCCTCAACAACAACAACCTCAAACACACACTACAACAACACCTTTAGCCGCTTCTTCATCTGACACTACATCTTCACAATCTCTTGATCATCTCTCACCAATGCCTTCTCAAGAATTTGGAAACAAACAAGAACTAGAACAACAAGTTCATCAACAACTCCGAAAAGGTAAATATGTAAGTCCTGTTTGGAAACCAAATGAAATGCTATGGTTAGCAAGAGCATGGAAAGAACAATACCAAACAGGTTCAGATTCATCTCAACAACAACAGCAACAACAACAACAATCAGAGTTGGGAATGAGTAGAGGTAAAACAAGAGCTGACAAAGACAAAGAAGTTGCTGAATTTCTAAACAAACATGGTGTTAATAGAGACGCCAAAACCGCAGGTACTAAATGGGATAACATGCTAGGTGAATTTAGGAAAGTTTATGAATGGGAAAGAGGTGGTGAAAGAGAACAAATTGGAAAAAGCTATTTTAGGCTTTCACCTTATGAAAGAAAGTTGCATAGGTTACCAGCTTCTTTTGATGAAGAAGTTTTTGAAGAACTTTCACAGTTCATGGGATCAAGAATGAGATCTTCTTCTCATGGTGGTAGAATTGGTTCTTCTTCTTTTGTTTCTTGTGATGAAACTAGAACAAGATCTCTTCCTCCTCCAAGACCCTTCAAAGATGATGAACTTCCTCTATCAGCTAGGACAAAGCAATTGGCAGTGACAAGTGGTGGAGGTGAACCATTTTTTCATGGTCATAGAGGGAACATATTAGGGTTAGATTCTATGATGGAGATTTCAACACCTTGTGCTAATACAAAAGAATTAAGAAGAATTGGTAAGATAAAAATGACATGGGAAGAATCAGTGAGTTTATGGGGAGAAGAAGGCGAAGTTCATAGAGGGAGAGTGAGGCTACAAAATTCAAGTTTTCTACATGCTGATGAAATAACTTGTTTTGATGATGCAATGGTGATTTGTCCTTTGGAATCTTTTGAGGATGGTCCTTTGAAAGGTTTTTCAGTTGATAGATTTGTTTCTGGACAACAAGTTAAAGTTTTTGGAAGAAGAAAATCTTCTTCAACTTCTTCTAGTTTTGCTGAAAGAGTTCAACCTATTAACAAACCAATTCCTATAAGATCAATTGTTCCATTGGATTATAGAGACCCAACTGAGTACTACATGGATCATCTTCTTCATGTCTCATCACCACAATCACTTCCATCATTATTCGAACTCAAGCATTATCTTCAAGAACCTCCACTGCCGAATCTGCGTTTTCCTTTGCGAAAAGAAGTGTTTGAGGATTTACCACAAGGTAAGGAATTCTTCTTCACAACAACCTCAGAGCCTTTGGATTGTAGATCCATAATCTATGATATTGTCGGCCCCATCATCCGAAACAACAATAACAACCCTAGTTGTTGTACTCTTCCATTTTCTAGTAGAGACTCTTTCATTGGTGTTTGGGATGATTGTATCAATAGGGTCGTTTCAAGATTCTGCCGCGAAGATGTCGTAATTACTAGAAAACCCTTTTCGTATTGGTCGAATTCACAATCACAAGATACATTGTTGTTGTTGCAAGATGAATGGCCTAATGTGAGTGGGTTTGTGAACAACTTTTGTTTATGGAGAGGTGAAGAATGTGAAGAGTTTAAAGAGAATCATATTCAACAACAAAATCCTTCATCGAGTATCATTCAAAAATTACTATGGAGTTATTTGGATTTACCTTATATCCTTGGTTACTATGCAATTGGAAACAAGGTAACATTTTGTGCAATTAGTAAATCACAAGAAGATGGAAAAATCATTAGAACTGATTTACATCAAGTGAATCTAACAACACCGAGTGAAAGATTCAAAGCATTAGTACCATGTTTTAGAATCGGAATTTTGTTATCAATATTAAGCAGACAATGCTTAACCATGCAAAAGGGTAGTTTCGTCTATAGTGATTTCGAAAGATATAGTTTTGGAAACGGTGTTATAATAGAAATGACACCAAACACATGCAAAAGGGTATATTCGGAAAAGAGAAAATGGTGTTCCGTGAAAGAGGTTTACGAGATTCTAGATCATAGAATCCCACATAGTGAGTTTTTGTTTAAGGTTGTCGAAGACATATACGACATGAGTTTGGTTTTTAAGCCACGAGGGATAAGAGTTAAACCTTTGAATATAGAACAGCTTGTGGAAGCCCTAAAGTATGTTACAAAAGCTTTGGTCGCATTACACGACTTGTCGTTTATGCATAGAGATTTAGGTTGGGAGAATGTTATGATGAGAGAAGGTGGTGAGTGGTTTGTAAGCGGGTTCGACGAAGCGGCCGGTGCGCCGGAGTTGAATAAGTACGTTAAGGAGGGTGCTACGGCGGAGCGTGGGAGACACGCACCGGAGATGGAGAGAGGATTACATGGAGTTAAGGTTGATGTGTGGGGTGTTGGGTATTTGATAATGACAAGTGGGTTGATGAGTGTGCCGAAGATGTTAAGAGAGTTGCAGAATTGGTGCATGGAGCAGAATCCGGAGCAGAGACCTACTGCCGCCGATTGTTACCATCATTTGTTGCAACTTCAGTCGTCTTTGATGGTGTCAGGTGGTGTTGCCGGTGGTGGTGGGTTGATGTGA 2892 0.3855 MQVVVVSGTNPFISSPLYVSTGASSSPFENQFETTTLNTTKRPRYSGQWKLLPSPPSQQQQKQPQAQTQINILNPTTESKSTTPSPSNPQQQQPQTHTTTTPLAASSSDTTSSQSLDHLSPMPSQEFGNKQELEQQVHQQLRKGKYVSPVWKPNEMLWLARAWKEQYQTGSDSSQQQQQQQQQSELGMSRGKTRADKDKEVAEFLNKHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQIGKSYFRLSPYERKLHRLPASFDEEVFEELSQFMGSRMRSSSHGGRIGSSSFVSCDETRTRSLPPPRPFKDDELPLSARTKQLAVTSGGGEPFFHGHRGNILGLDSMMEISTPCANTKELRRIGKIKMTWEESVSLWGEEGEVHRGRVRLQNSSFLHADEITCFDDAMVICPLESFEDGPLKGFSVDRFVSGQQVKVFGRRKSSSTSSSFAERVQPINKPIPIRSIVPLDYRDPTEYYMDHLLHVSSPQSLPSLFELKHYLQEPPLPNLRFPLRKEVFEDLPQGKEFFFTTTSEPLDCRSIIYDIVGPIIRNNNNNPSCCTLPFSSRDSFIGVWDDCINRVVSRFCREDVVITRKPFSYWSNSQSQDTLLLLQDEWPNVSGFVNNFCLWRGEECEEFKENHIQQQNPSSSIIQKLLWSYLDLPYILGYYAIGNKVTFCAISKSQEDGKIIRTDLHQVNLTTPSERFKALVPCFRIGILLSILSRQCLTMQKGSFVYSDFERYSFGNGVIIEMTPNTCKRVYSEKRKWCSVKEVYEILDHRIPHSEFLFKVVEDIYDMSLVFKPRGIRVKPLNIEQLVEALKYVTKALVALHDLSFMHRDLGWENVMMREGGEWFVSGFDEAAGAPELNKYVKEGATAERGRHAPEMERGLHGVKVDVWGVGYLIMTSGLMSVPKMLRELQNWCMEQNPEQRPTAADCYHHLLQLQSSLMVSGGVAGGGGLM* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2418 963 MobiDBLite consensus disorder prediction 169 189 - -
Psa1g2418 963 PANTHER OSJNBA0043A12.37 PROTEIN-RELATED 33 955 - -
Psa1g2418 963 CDD PKc 809 943 - -
Psa1g2418 963 MobiDBLite consensus disorder prediction 280 300 - -
Psa1g2418 963 SUPERFAMILY Protein kinase-like (PK-like) 785 943 IPR011009 -
Psa1g2418 963 MobiDBLite consensus disorder prediction 77 118 - -
Psa1g2418 963 PANTHER GB|AAB80672.1 33 955 - -
Psa1g2418 963 MobiDBLite consensus disorder prediction 169 197 - -
Psa1g2418 963 Gene3D Transferase(Phosphotransferase) domain 1 805 951 - -
Psa1g2418 963 MobiDBLite consensus disorder prediction 280 308 - -
Psa1g2418 963 ProSiteProfiles Protein kinase domain profile. 662 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Cr-1 Psa1g2418 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2418 - - mtr:MTR_0007s0220 1493.4