Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2389 ATGCCTTATCTCACCAGACTACAAACTATGTCTATCCAAACCTTGCAACCACCATCTACAACAACTGATCCCTACCAATTCCTCAAAATCCAACACAATCACAACGATACACTAACTCGAAATCTTGAAGATCCACACACTTTACCTTCATCAGATACTACTCTCCCAATCTCTGTTCTAACCAAAGACATCACCATCAATAACTCAAACCAAACATGGCTTCGGTTATTCCTACCTAAAAACACAACATTTTCAAACAAAAACAACAAATTTCTACCACTTATTGTTTTCTTCCATGGAGGTGGCTTCATCCTTCTAAGTGCAGCCTCCACGAGGTTCCACAACTTTTGTGTTGAAATGGCTGAAACTGTGGAGGCCGTCGTCGCATCGGTTGAATATCGCCTCGCACCGGAGCACCGGTTGCCGGCAGCATACGATGATGCTATGGAAGCATTGAGTTTGATTAGAACTAGTGAAGATGAATGGTTGACTAAATATGTTGATTATTCTAAATGTTTTCTAATGGGAAATAGTGCTGGAGCTAGCATTGCCTACCATGCAGGACTACGTGTGGTTGAAAATGTAAAAGATTTGGAGCCATTGAAAATTCAAGGGCTGATATTGCATCAACCGTTTTTTGGTGGGATCCAGAGGACTGAATCAGAGGTGAGATTAGAGAATGATCCTGTTTTTCCATTGTGTGTTAGTGATATGATGTGGGAATTAGCATTACCAATTGGAGTTGATCGTGATCACGAGTATTCCAATCTAATAGTTGGAAATGATATTGATGAAAAATTTGAGAAGATTAAGGATCAAGGGTGGAAGGTGTTGGTGAGTATGAACGGTGGAGATCTATTGGTAGATCGTAATAAAGAGTTGGTGAAACTGATGAAGGAGAAGGGTGTGGACGTGGTGGTGGATTATCAAGAAGGTGGTTTTCATGGTATTGAATTTTTTGAGGCATCTATAACAAAGAACTTCATTTTGAGGTACCATCAAATTCCAAAGACCATTGCATTAACAATTAGAACTTCAAATTCAAAAACATTTGGTATCATTAAAAGGAGGCCTTACAGCTGA 1083 0.3961 MPYLTRLQTMSIQTLQPPSTTTDPYQFLKIQHNHNDTLTRNLEDPHTLPSSDTTLPISVLTKDITINNSNQTWLRLFLPKNTTFSNKNNKFLPLIVFFHGGGFILLSAASTRFHNFCVEMAETVEAVVASVEYRLAPEHRLPAAYDDAMEALSLIRTSEDEWLTKYVDYSKCFLMGNSAGASIAYHAGLRVVENVKDLEPLKIQGLILHQPFFGGIQRTESEVRLENDPVFPLCVSDMMWELALPIGVDRDHEYSNLIVGNDIDEKFEKIKDQGWKVLVSMNGGDLLVDRNKELVKLMKEKGVDVVVDYQEGGFHGIEFFEASITKNFILRYHQIPKTIALTIRTSNSKTFGIIKRRPYS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2389 360 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 16 332 - -
Psa1g2389 360 Pfam alpha/beta hydrolase fold 95 317 IPR013094 GO:0016787
Psa1g2389 360 PANTHER ARYLACETAMIDE DEACETYLASE 16 332 - -
Psa1g2389 360 SUPERFAMILY alpha/beta-Hydrolases 22 321 IPR029058 -
Psa1g2389 360 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 95 111 IPR002168 GO:0016787
Psa1g2389 360 Gene3D alpha/beta hydrolase 25 334 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2389 Psa-Chr1 194735722 194738824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2389 42 316 Carbohydrate Esterase AT5G16080 37.282 5.23e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2389 - - gmx:100795069 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g2389 1 194735722 194738824 Psa6g4632 6 403128129 403129900 PCT