Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2377 ATGGAAGGGAATTTATCACAAGGAGGTATAATTCAAGGTGGTGGTAGTGGTTCTTTTGGTTTGCCTGGATCAATGCGAGTTCATCGTCAAGCACAGATGAACCAACATCAAGCTCATCCTTGTCAAGGGTCTGCGGGGCATTCGTCGACTCGTGAAGGTTTTCCTCTTACAATTGGGACATTGCAGAACTGTGATCAGAAGATATCAATGAAAGAGTTTGGTCACGGAGATAGGAGCAAAAACTCGGCAAGTGAGGAAGATGAGCCTGAGGAAGGTGGTGAGGGTCATCATCAAGAGGGTGCGAGAGGGAAAAAGGGGTCGCCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTGAGGCTTTTGATAACGGCGGTGTCTTATATTGGTGAGGACGGGACTTCAGAAGGCGGTGGTGGAGGAAGGAGGAAATTTGCGGTTTTGCAGAAAAAGGGTAAGTGGAAATCTATTTCTAAGGTTATGGCTGAAAGAGGTTATCGCGTTTCGCCTCAGCAATGCGAGGATAAGTTTAACGATCTTAATAAAAGGTACAAAAGGCTTAACGATATGCTTGGAAGAGGAACTTCTTGTCAAGTTGTTGAAAATCCAGCTTTGTTGGATATTATTGATTATCTGAACGAGAAAGAGAAGGACGATGTTAGAAAAATATTAAACTCGAAACAGCTCTTCTATGAAGAGATGTGTTCTTACCATAATTGCAATAGATTGCATTTGCCGCATGATCCCGCATTGCAACGGTCCCTTCAGATAGCTCTCAGAAATCGAGATGATCATGATAACGATGATGTGAGAAGGTCCTATCATGACGACCATGACGAGGATAGTCATGATATGGAAACAGATGATCACGACGAGTTCGAAGAGAATTACGCTTCCCATTGTGAAAGTCGAGGAATCTTCGGGGGATTGGGAGGATCTTCAAAAAGACTAAGACAAGGCCAAGGTCAAGAAGACGCCACTACTTTCGGGAACTCTTTAAGTTGTCAGGAGTACAATAAAAGTCTGTATCCTCATGGGCAGATCGCGCAACCTGACGGAAACCAAGCCTTACCCGAAAACATGAGAGCAGCTTTGTTACAGAAGCAATGGATTGAATCTCGTTCGGTTCAGTTGGAAGAACAGAAGCTACAAATTCAGGTCGAGATGATGGAATTAGAGAAAGAAAGATTCAAGTGGCAGAAGTTTAGCAAGAAAAAAGACCGAGAGTTGGAGATGTTCAAGCTGGAGAATGAAAGAATGAAGATCGAGAATGAACGTATTGCTTTAGAGCTAAAACGGAAGGAGATCGTCGGCACCAGCTTTAACTAG 1329 0.4379 MEGNLSQGGIIQGGGSGSFGLPGSMRVHRQAQMNQHQAHPCQGSAGHSSTREGFPLTIGTLQNCDQKISMKEFGHGDRSKNSASEEDEPEEGGEGHHQEGARGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGTSEGGGGGRRKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDIIDYLNEKEKDDVRKILNSKQLFYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDNDDVRRSYHDDHDEDSHDMETDDHDEFEENYASHCESRGIFGGLGGSSKRLRQGQGQEDATTFGNSLSCQEYNKSLYPHGQIAQPDGNQALPENMRAALLQKQWIESRSVQLEEQKLQIQVEMMELEKERFKWQKFSKKKDRELEMFKLENERMKIENERIALELKRKEIVGTSFN* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2377 442 Coils Coil 405 435 - -
Psa1g2377 442 Coils Coil 375 395 - -
Psa1g2377 442 Gene3D - 114 186 - -
Psa1g2377 442 MobiDBLite consensus disorder prediction 72 110 - -
Psa1g2377 442 MobiDBLite consensus disorder prediction 262 281 - -
Psa1g2377 442 Pfam Myb/SANT-like DNA-binding domain 111 237 IPR044822 -
Psa1g2377 442 PANTHER FACTOR, PUTATIVE-RELATED 1 437 - -
Psa1g2377 442 MobiDBLite consensus disorder prediction 262 290 - -
Psa1g2377 442 MobiDBLite consensus disorder prediction 30 50 - -
Psa1g2377 442 PANTHER F16F4.11 PROTEIN-RELATED 1 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2377 Psa-Chr1 193655046 193657662 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa1g2377 Myb_DNA-bind_4 1.2e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2377 - - mtr:MTR_6g035315 726.087