Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2356 ATGGTACTAAGAATGTGTTCAAAATACTATGATGCTTATGGTATTGTGAAATATCTTGAAAACGAAGCCATGTCGAAACTCGAAAGCATTATTCAATGTATGGCGGCTAGTATTCTTCGTTGTATTGCTTTCGGATATGCTGAAGTTGAAGTTCAAGAGCTGGGAGATGAACGAGAAAACAACGAGGTAGTGGTAAAAGACAGCGGTTTAACATTATTAGGACTTGTCGGAATCAAGGATCTGCGTCGTCTGAGGTGA 258 0.3953 MVLRMCSKYYDAYGIVKYLENEAMSKLESIIQCMAASILRCIAFGYAEVEVQELGDERENNEVVVKDSGLTLLGLVGIKDLRRLR* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2356 85 Gene3D - 1 83 IPR023299 GO:0000166
Psa1g2356 85 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 81 IPR023299 GO:0000166
Psa1g2356 85 PANTHER CALCIUM-TRANSPORTING ATPASE 12, PLASMA MEMBRANE-TYPE 1 83 - -
Psa1g2356 85 PANTHER CATION TRANSPORTING ATPASE 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2356 Psa-Chr1 188590278 188592316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2356 1 80 Primary Pumps ATPases AT3G63380 45.000 1.39e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2356 K01537 - gmx:100793918 99.7525